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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103833941   pentatricopeptide repeat-containing protein At5g02860 
 bna-r.1   106360937   pentatricopeptide repeat-containing protein At5g02860 
 bna-r.1   111207868   pentatricopeptide repeat-containing protein At5g02860 
 ath-u.5   AT5G02860   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107908856   pentatricopeptide repeat-containing protein At5g02860 
 ghi-r.1   107907719   pentatricopeptide repeat-containing protein At5g02860 
 cit-r.1   102617122   pentatricopeptide repeat-containing protein At5g02860 
 gma-u.5   100813079   pentatricopeptide repeat-containing protein At5g02860 
 gma-u.5   100796014   pentatricopeptide repeat-containing protein At5g02860 
 vvi-u.5   100257649   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478722   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478642   pentatricopeptide repeat-containing protein At5g02860 
 mtr-u.5   25488998   pentatricopeptide repeat-containing protein At5g02860 
 sly-u.5   101245210   pentatricopeptide repeat-containing protein 
 sot-r.1   102593457   pentatricopeptide repeat-containing protein At5g02860 
 nta-r.1   107771589   uncharacterized LOC107771589 
 nta-r.1   107768112   uncharacterized LOC107768112 
 osa-u.5   4343774   pentatricopeptide repeat-containing protein At5g02860 
 zma-u.5   103633383   pentatricopeptide repeat-containing protein 
 tae-r.2   123188170   pentatricopeptide repeat-containing protein At5g02860-like 
 tae-r.2   123052231   pentatricopeptide repeat-containing protein At5g02860 
 tae-r.2   123044357   pentatricopeptide repeat-containing protein At5g02860 
 hvu-r.1   123425479   pentatricopeptide repeat-containing protein At5g02860 
 sbi-r.1   8078985   pentatricopeptide repeat-containing protein At5g02860 
 bdi-r.1   100828364   pentatricopeptide repeat-containing protein At5g02860 

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Top 50 coexpressed genes to 103833941 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103833941 (bra-r.6 coexpression data)

CoexMap"103833941"


braLOC103833941 | Entrez gene ID : 103833941    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_018509386.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_018509386.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_018509386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103833941
bna-r.1
for
106360937
bna-r.1
for
111207868
ath-u.5
for
AT5G02860
ghi-r.1
for
107908856
ghi-r.1
for
107907719
cit-r.1
for
102617122
gma-u.5
for
100813079
gma-u.5
for
100796014
vvi-u.5
for
100257649
ppo-u.5
for
7478722
ppo-u.5
for
7478642
mtr-u.5
for
25488998
sly-u.5
for
101245210
sot-r.1
for
102593457
nta-r.1
for
107771589
nta-r.1
for
107768112
osa-u.5
for
4343774
zma-u.5
for
103633383
tae-r.2
for
123188170
tae-r.2
for
123052231
tae-r.2
for
123044357
hvu-r.1
for
123425479
sbi-r.1
for
8078985
bdi-r.1
for
100828364


Ortholog ID: 10307
Species bra bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103833941 LOC106360937 LOC111207868 AT5G02860 LOC107908856 LOC107907719 LOC102617122 LOC100813079 LOC100796014 LOC100257649 LOC7478722 LOC7478642 LOC25488998 LOC101245210 LOC102593457 LOC107771589 LOC107768112 LOC4343774 LOC103633383 LOC123188170 LOC123052231 LOC123044357 LOC123425479 LOC8078985 LOC100828364
Function* pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860 uncharacterized LOC107771589 uncharacterized LOC107768112 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860-like pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
gma00500 Starch and sucrose metabolism 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot00920 Sulfur metabolism 3
sot03040 Spliceosome 2
sot00270 Cysteine and methionine metabolism 2
sot00543 Exopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103833941 106360937 111207868 831761 107908856 107907719 102617122 100813079 100796014 100257649 7478722 7478642 25488998 101245210 102593457 107771589 107768112 4343774 103633383 123188170 123052231 123044357 123425479 8078985 100828364
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