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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103853108   ethylene-responsive transcription factor RAP2-4 
 bra-r.6   103869071   ethylene-responsive transcription factor RAP2-13 
 bra-r.6   103864333   ethylene-responsive transcription factor ERF056 
 bna-r.1   106451235   ethylene-responsive transcription factor RAP2-13-like 
 bna-r.1   106368610   ethylene-responsive transcription factor ERF060-like 
 ath-u.5   RAP2.4   uncharacterized protein 
 ath-u.5   AT2G22200   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT4G39780   Integrase-type DNA-binding superfamily protein 
 ghi-r.1   107898106   ethylene-responsive transcription factor ERF060-like 
 ghi-r.1   107905038   ethylene-responsive transcription factor RAP2-4 
 ghi-r.1   107913662   ethylene-responsive transcription factor ERF060 
 cit-r.1   102614278   ethylene-responsive transcription factor RAP2-4-like 
 cit-r.1   102614029   ethylene-responsive transcription factor RAP2-13 
 gma-u.5   106796800   ethylene-responsive transcription factor ERF060 
 gma-u.5   100800478   ethylene-responsive transcription factor RAP2-4 
 gma-u.5   100797648   ethylene-responsive transcription factor ERF060 
 vvi-u.5   100261438   ethylene-responsive transcription factor RAP2-4 
 vvi-u.5   100245515   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7468904   ethylene-responsive transcription factor RAP2-13-like 
 ppo-u.5   7471518   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7495144   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   11437084   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   25489428   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   25501933   ethylene-responsive transcription factor ERF060 
 sly-u.5   ERF-H11   ethylene response factor H.11 
 sly-u.5   ERF-H10   ethylene response factor H.10 
 sly-u.5   DREB3   dehydration-responsive element binding protein 3 
 sot-r.1   102585333   ethylene-responsive transcription factor RAP2-13 
 sot-r.1   102591370   ethylene-responsive transcription factor RAP2-13 
 sot-r.1   102602854   ethylene-responsive transcription factor RAP2-4 
 nta-r.1   107819325   ethylene-responsive transcription factor RAP2-4-like 
 nta-r.1   107759638   ethylene-responsive transcription factor RAP2-13-like 
 nta-r.1   107774257   ethylene-responsive transcription factor RAP2-4-like 
 osa-u.5   4345541   ethylene-responsive transcription factor RAP2-4 
 osa-u.5   4340525   ethylene-responsive transcription factor RAP2-13 
 osa-u.5   4330752   ethylene-responsive transcription factor RAP2-4 
 zma-u.5   100502435   putative AP2/EREBP transcription factor superfamily protein 
 zma-u.5   100280553   uncharacterized LOC100280553 
 zma-u.5   103632654   uncharacterized LOC103632654 
 tae-r.2   123166284   ethylene-responsive transcription factor RAP2-13 
 tae-r.2   123138190   ethylene-responsive transcription factor RAP2-4 
 tae-r.2   123111823   ethylene-responsive transcription factor RAP2-13 
 hvu-r.1   123395344   ethylene-responsive transcription factor RAP2-13 
 hvu-r.1   123402980   ethylene-responsive transcription factor RAP2-4-like 
 hvu-r.1   123412187   ethylene-responsive transcription factor RAP2-13-like 
 sbi-r.1   8073540   ethylene-responsive transcription factor ERF060 
 sbi-r.1   8080057   ethylene-responsive transcription factor RAP2-13 
 sbi-r.1   8066410   ethylene-responsive transcription factor ERF060 
 bdi-r.1   100839894   ethylene-responsive transcription factor RAP2-4 
 bdi-r.1   100838838   ethylene-responsive transcription factor RAP2-13 
 bdi-r.1   100836054   ethylene-responsive transcription factor RAP2-13 

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Top 50 coexpressed genes to 103853108 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103853108 (bra-r.6 coexpression data)

CoexMap"103835096"


braLOC103835096 | Entrez gene ID : 103835096    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 2 3 2 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1840 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
Protein XP_009109443.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 5,  plas 3  (predict for XP_009109443.2)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for XP_009109443.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103853108
bra-r.6
for
103869071
bra-r.6
for
103864333
bna-r.1
for
106451235
bna-r.1
for
106368610
ath-u.5
for
RAP2.4
ath-u.5
for
AT2G22200
ath-u.5
for
AT4G39780
ghi-r.1
for
107898106
ghi-r.1
for
107905038
ghi-r.1
for
107913662
cit-r.1
for
102614278
cit-r.1
for
102614029
gma-u.5
for
106796800
gma-u.5
for
100800478
gma-u.5
for
100797648
vvi-u.5
for
100261438
vvi-u.5
for
100245515
ppo-u.5
for
7468904
ppo-u.5
for
7471518
ppo-u.5
for
7495144
mtr-u.5
for
11437084
mtr-u.5
for
25489428
mtr-u.5
for
25501933
sly-u.5
for
ERF-H11
sly-u.5
for
ERF-H10
sly-u.5
for
DREB3
sot-r.1
for
102585333
sot-r.1
for
102591370
sot-r.1
for
102602854
nta-r.1
for
107819325
nta-r.1
for
107759638
nta-r.1
for
107774257
osa-u.5
for
4345541
osa-u.5
for
4340525
osa-u.5
for
4330752
zma-u.5
for
100502435
zma-u.5
for
100280553
zma-u.5
for
103632654
tae-r.2
for
123166284
tae-r.2
for
123138190
tae-r.2
for
123111823
hvu-r.1
for
123395344
hvu-r.1
for
123402980
hvu-r.1
for
123412187
sbi-r.1
for
8073540
sbi-r.1
for
8080057
sbi-r.1
for
8066410
bdi-r.1
for
100839894
bdi-r.1
for
100838838
bdi-r.1
for
100836054


Ortholog ID: 914
Species bra bra bra bna bna ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC103853108 LOC103864333 LOC103830541 LOC106430468 LOC106402048 RAP2.4 AT2G22200 AT1G22190 LOC107905038 LOC107962440 LOC107950470 LOC102614278 LOC102614029 LOC106796800 LOC100815162 DREB3 LOC100261438 LOC100245515 LOC7468904 LOC7471518 LOC7456918 LOC11437084 LOC25489428 LOC25501933 ERF-H11 ERF-H10 DREB3 LOC102585333 LOC102591370 LOC102602854 LOC107819325 LOC107759638 LOC107774257 LOC4340525 LOC4330752 LOC4346884 LOC103632654 LOC103637851 LOC542569 LOC123166284 LOC123128343 LOC123159838 LOC123395344 LOC123402980 LOC123412187 LOC8073540 LOC8066410 LOC8065368 LOC100839894 LOC100838838 LOC100836054
Function* ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF056 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor ERF060-like ethylene-responsive transcription factor RAP2-13-like uncharacterized protein Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor ERF060-like dehydration responsive element-binding protein 3 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 ethylene response factor H.11 ethylene response factor H.10 dehydration-responsive element binding protein 3 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 uncharacterized LOC103632654 ethylene-responsive transcription factor RAP2-13 uncharacterized LOC542569 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01240 Biosynthesis of cofactors 4
nta01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04016 MAPK signaling pathway - plant 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103853108 103864333 103830541 106430468 106402048 844143 816754 838824 107905038 107962440 107950470 102614278 102614029 106796800 100815162 732559 100261438 100245515 7468904 7471518 7456918 11437084 25489428 25501933 101250096 101264209 543714 102585333 102591370 102602854 107819325 107759638 107774257 4340525 4330752 4346884 103632654 103637851 542569 123166284 123128343 123159838 123395344 123402980 123412187 8073540 8066410 8065368 100839894 100838838 100836054
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