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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103835318   homeobox-DDT domain protein RLT1 
 bra-r.6   103827923   homeobox-DDT domain protein RLT2 
 bra-r.6   103838952   homeobox-DDT domain protein RLT1 
 bna-r.1   106435103   homeobox-DDT domain protein RLT1 
 bna-r.1   106427541   homeobox-DDT domain protein RLT2 
 bna-r.1   106422060   homeobox-DDT domain protein RLT1 
 ath-u.5   RLT2   Homeodomain-like transcriptional regulator 
 ath-u.5   HB-1   homeobox-1 
 ghi-r.1   107934716   homeobox-DDT domain protein RLT2 
 ghi-r.1   107960219   homeobox-DDT domain protein RLT1 
 ghi-r.1   107946181   homeobox-DDT domain protein RLT2 
 cit-r.1   102620408   homeobox-DDT domain protein RLT2-like 
 cit-r.1   102609052   homeobox-DDT domain protein RLT1 
 gma-u.5   102665424   homeobox-DDT domain protein RLT1-like 
 gma-u.5   100818817   homeobox-DDT domain protein RLT1 
 gma-u.5   100797480   homeobox-DDT domain protein RLT2 
 vvi-u.5   100247033   homeobox-DDT domain protein RLT1 
 vvi-u.5   100250601   homeobox-DDT domain protein RLT2 
 ppo-u.5   18106807   homeobox-DDT domain protein RLT2 
 ppo-u.5   7476373   homeobox-DDT domain protein RLT1 
 ppo-u.5   7491716   homeobox-DDT domain protein RLT2 
 mtr-u.5   25493092   homeobox-DDT domain protein RLT1 
 mtr-u.5   11441271   homeobox-DDT domain protein RLT1 
 mtr-u.5   11439750   homeobox-DDT domain protein RLT2 
 sly-u.5   101253299   homeobox-DDT domain protein RLT2 
 sly-u.5   101262772   homeobox-DDT domain protein RLT1 
 sot-r.1   102587822   uncharacterized LOC102587822 
 sot-r.1   102579072   uncharacterized LOC102579072 
 nta-r.1   107783246   homeobox-DDT domain protein RLT1 
 nta-r.1   107777592   homeobox-DDT domain protein RLT2 
 nta-r.1   107766373   homeobox-DDT domain protein RLT1 
 osa-u.5   4325898   homeobox-DDT domain protein RLT2 
 osa-u.5   4339610   homeobox-DDT domain protein RLT2 
 zma-u.5   103651374   homeobox-DDT domain protein RLT2 
 zma-u.5   103630726   Putative homeodomain-like transcription factor superfamily protein 
 zma-u.5   103635335   Putative homeodomain-like transcription factor superfamily protein 
 tae-r.2   123183086   homeobox-DDT domain protein RLT2 
 tae-r.2   123145755   homeobox-DDT domain protein RLT2 
 tae-r.2   123068155   homeobox-DDT domain protein RLT2 
 hvu-r.1   123450209   homeobox-DDT domain protein RLT2-like 
 hvu-r.1   123444072   homeobox-DDT domain protein RLT2-like 
 sbi-r.1   8061841   homeobox-DDT domain protein RLT2 
 sbi-r.1   8155530   homeobox-DDT domain protein RLT2 
 sbi-r.1   8080833   homeobox-DDT domain protein RLT2 
 bdi-r.1   100827669   homeobox-DDT domain protein RLT2 
 bdi-r.1   100835009   homeobox-DDT domain protein RLT2 
 cre-r.1   CHLRE_03g174500v5   uncharacterized protein 

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Top 50 coexpressed genes to 103835318 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103835318 (bra-r.6 coexpression data)

CoexMap"103835318"


braLOC103835318 | Entrez gene ID : 103835318    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 3 2 3 2 3 3 2 2 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (676 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
Protein XP_009109718.1 [sequence] [blastp]
XP_009109719.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009109718.1)
nucl 9  (predict for XP_009109719.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009109718.1)
other 9  (predict for XP_009109719.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103835318
bra-r.6
for
103827923
bra-r.6
for
103838952
bna-r.1
for
106435103
bna-r.1
for
106427541
bna-r.1
for
106422060
ath-u.5
for
RLT2
ath-u.5
for
HB-1
ghi-r.1
for
107934716
ghi-r.1
for
107960219
ghi-r.1
for
107946181
cit-r.1
for
102620408
cit-r.1
for
102609052
gma-u.5
for
102665424
gma-u.5
for
100818817
gma-u.5
for
100797480
vvi-u.5
for
100247033
vvi-u.5
for
100250601
ppo-u.5
for
18106807
ppo-u.5
for
7476373
ppo-u.5
for
7491716
mtr-u.5
for
25493092
mtr-u.5
for
11441271
mtr-u.5
for
11439750
sly-u.5
for
101253299
sly-u.5
for
101262772
sot-r.1
for
102587822
sot-r.1
for
102579072
nta-r.1
for
107783246
nta-r.1
for
107777592
nta-r.1
for
107766373
osa-u.5
for
4325898
osa-u.5
for
4339610
zma-u.5
for
103651374
zma-u.5
for
103630726
zma-u.5
for
103635335
tae-r.2
for
123183086
tae-r.2
for
123145755
tae-r.2
for
123068155
hvu-r.1
for
123450209
hvu-r.1
for
123444072
sbi-r.1
for
8061841
sbi-r.1
for
8155530
sbi-r.1
for
8080833
bdi-r.1
for
100827669
bdi-r.1
for
100835009
cre-r.1
for
CHLRE_03g174500v5


Ortholog ID: 2241
Species bra bra bra bna bna bna ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC103835318 LOC103827923 LOC103838952 LOC106435103 LOC106422060 LOC106361685 RLT2 HB-1 LOC121230890 LOC121230889 LOC107960218 LOC102620408 LOC102609052 LOC100818817 LOC100797480 LOC100784945 LOC100247033 LOC100250601 LOC7476373 LOC7491716 LOC18103066 LOC25493092 LOC11441271 LOC11439750 LOC101253299 LOC101262772 LOC102587822 LOC102579072 LOC107783246 LOC107777592 LOC107766373 LOC4325898 LOC4339610 LOC103651374 LOC103630726 LOC103641705 LOC123145755 LOC123078782 LOC123070323 LOC123450209 LOC123444072 LOC8061841 LOC8155530 LOC8080833 LOC100827669 LOC100835009 CHLRE_03g174500v5
Function* homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1-like Homeodomain-like transcriptional regulator homeobox-1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2-like homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 uncharacterized LOC102587822 uncharacterized LOC102579072 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 Putative homeodomain-like transcription factor superfamily protein homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2-like homeobox-DDT domain protein RLT2-like homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03013 Nucleocytoplasmic transport 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03022 Basal transcription factors 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103835318 103827923 103838952 106435103 106422060 106361685 834441 839740 121230890 121230889 107960218 102620408 102609052 100818817 100797480 100784945 100247033 100250601 7476373 7491716 18103066 25493092 11441271 11439750 101253299 101262772 102587822 102579072 107783246 107777592 107766373 4325898 4339610 103651374 103630726 103641705 123145755 123078782 123070323 123450209 123444072 8061841 8155530 8080833 100827669 100835009 5728878
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