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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103835382   transcription factor bHLH110 
 bna-r.1   106367912   transcription factor bHLH110-like 
 bna-r.1   106389580   transcription factor bHLH110 
 ath-u.5   AT1G27660   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107936552   transcription factor bHLH110 
 ghi-r.1   107957939   transcription factor bHLH110 
 ghi-r.1   107945827   transcription factor bHLH110 
 cit-r.1   102623049   transcription factor bHLH110 
 gma-u.5   100782565   transcription factor bHLH111 
 vvi-u.5   100260944   transcription factor bHLH110 
 ppo-u.5   7479726   transcription factor bHLH110 
 mtr-u.5   25490216   transcription factor bHLH110 
 sly-u.5   101267521   transcription factor bHLH110 
 sot-r.1   102601100   transcription factor bHLH110 
 nta-r.1   107783563   transcription factor bHLH110 
 nta-r.1   107790733   transcription factor bHLH110 
 zma-u.5   103649916   transcription factor bHLH110 
 bdi-r.1   100823554   transcription factor bHLH110 

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Top 50 coexpressed genes to 103835382 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103835382 (bra-r.6 coexpression data)

CoexMap"103835382"


braLOC103835382 | Entrez gene ID : 103835382    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta zma bdi osa tae sbi hvu cre
Paralog 1 2 1 3 1 1 1 1 1 1 1 2 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (676 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (391 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (478 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
Protein XP_009109789.1 [sequence] [blastp]
XP_009109790.1 [sequence] [blastp]
XP_033133335.1 [sequence] [blastp]
XP_033133336.1 [sequence] [blastp]
XP_033133337.1 [sequence] [blastp]
XP_033133338.1 [sequence] [blastp]
XP_033133340.1 [sequence] [blastp]
XP_033133341.1 [sequence] [blastp]
XP_033133342.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009109789.1)
nucl 9  (predict for XP_009109790.1)
nucl 9  (predict for XP_033133335.1)
nucl 9  (predict for XP_033133336.1)
nucl 9  (predict for XP_033133337.1)
nucl 9  (predict for XP_033133338.1)
nucl 9  (predict for XP_033133340.1)
nucl 9  (predict for XP_033133341.1)
nucl 9,  cyto_nucl 5  (predict for XP_033133342.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_009109789.1)
other 5,  chlo 4  (predict for XP_009109790.1)
chlo 7  (predict for XP_033133335.1)
chlo 7  (predict for XP_033133336.1)
chlo 7  (predict for XP_033133337.1)
chlo 7  (predict for XP_033133338.1)
chlo 7  (predict for XP_033133340.1)
chlo 7  (predict for XP_033133341.1)
other 6,  chlo 3  (predict for XP_033133342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103835382
bna-r.1
for
106367912
bna-r.1
for
106389580
ath-u.5
for
AT1G27660
ghi-r.1
for
107936552
ghi-r.1
for
107957939
ghi-r.1
for
107945827
cit-r.1
for
102623049
gma-u.5
for
100782565
vvi-u.5
for
100260944
ppo-u.5
for
7479726
mtr-u.5
for
25490216
sly-u.5
for
101267521
sot-r.1
for
102601100
nta-r.1
for
107783563
nta-r.1
for
107790733
zma-u.5
for
103649916
bdi-r.1
for
100823554


Ortholog ID: 6145
Species bra bna bna ath ghi ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta zma bdi
Symbol LOC103835382 LOC106367912 LOC106389580 AT1G27660 LOC107936552 LOC107943430 LOC107909419 LOC102623049 LOC100782565 LOC100260944 LOC7479726 LOC7454376 LOC25490216 LOC101267521 LOC102601100 LOC107783563 LOC107790733 LOC103649916 LOC100823554
Function* transcription factor bHLH110 transcription factor bHLH110-like transcription factor bHLH110 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH111 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi03410 Base excision repair 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103835382 106367912 106389580 839658 107936552 107943430 107909419 102623049 100782565 100260944 7479726 7454376 25490216 101267521 102601100 107783563 107790733 103649916 100823554
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