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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111213815   ethylene-responsive transcription factor SHINE 3 
 bna-r.1   106365898   ethylene-responsive transcription factor SHINE 3 
 ghi-r.1   107903302   ethylene-responsive transcription factor WIN1 
 ghi-r.1   107901609   ethylene-responsive transcription factor SHINE 2 
 ghi-r.1   107915868   ethylene-responsive transcription factor WIN1 
 cit-r.1   102626923   ethylene-responsive transcription factor WIN1 
 cit-r.1   102620575   ethylene-responsive transcription factor SHINE 2 
 gma-u.5   100806821   ethylene-responsive transcription factor SHINE 2 
 vvi-u.5   100259484   ethylene-responsive transcription factor SHINE 2 
 vvi-u.5   100250826   ethylene-responsive transcription factor WIN1 
 ppo-u.5   7468634   ethylene-responsive transcription factor SHINE 2 
 ppo-u.5   7459028   ethylene-responsive transcription factor SHINE 2 
 sly-u.5   SHINE3   ethylene-responsive transcription factor SHINE3 
 sly-u.5   101258133   ethylene-responsive transcription factor WIN1-like 
 sly-u.5   ERF-H3   ethylene-responsive transcription factor WIN1/SHN1 
 nta-r.1   107788230   ethylene-responsive transcription factor WIN1-like 
 osa-u.5   4341466   ethylene-responsive transcription factor WIN1 
 zma-u.5   103638685   ethylene-responsive transcription factor WIN1 
 tae-r.2   123127287   ethylene-responsive transcription factor WIN1 
 tae-r.2   123141402   ethylene-responsive transcription factor WIN1 
 tae-r.2   123148174   ethylene-responsive transcription factor WIN1 
 bdi-r.1   100840291   ethylene-responsive transcription factor WIN1 
 bdi-r.1   100837885   ethylene-responsive transcription factor WIN1 

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Top 50 coexpressed genes to 111213815 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111213815 (bna-r.1 coexpression data)

CoexMap"103836031"


braLOC103836031 | Entrez gene ID : 103836031    
Species bna ghi cit gma vvi ppo sly nta osa zma tae bdi bra sot cre sbi ath mtr hvu
Paralog 2 3 2 1 2 2 3 1 1 1 3 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1840 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
Protein XP_009110488.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  chlo 1  (predict for XP_009110488.2)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_009110488.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111213815
bna-r.1
for
106365898
ghi-r.1
for
107903302
ghi-r.1
for
107901609
ghi-r.1
for
107915868
cit-r.1
for
102626923
cit-r.1
for
102620575
gma-u.5
for
100806821
vvi-u.5
for
100259484
vvi-u.5
for
100250826
ppo-u.5
for
7468634
ppo-u.5
for
7459028
sly-u.5
for
SHINE3
sly-u.5
for
101258133
sly-u.5
for
ERF-H3
nta-r.1
for
107788230
osa-u.5
for
4341466
zma-u.5
for
103638685
tae-r.2
for
123127287
tae-r.2
for
123141402
tae-r.2
for
123148174
bdi-r.1
for
100840291
bdi-r.1
for
100837885


Ortholog ID: 1186
Species ghi ghi cit cit gma gma vvi vvi ppo ppo sly sly sly nta nta osa zma tae tae tae bdi bdi
Symbol LOC107962894 LOC107896090 LOC102626923 LOC102620575 LOC100796962 LOC100794649 LOC100259484 LOC100250826 LOC7485479 LOC7470102 SHINE3 LOC101258133 ERF-H3 LOC107829873 LOC107805739 LOC4341466 LOC103638685 LOC123141402 LOC123134091 LOC123157531 LOC100840291 LOC100837885
Function* ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE3 ethylene-responsive transcription factor WIN1-like ethylene-responsive transcription factor WIN1/SHN1 ethylene-responsive transcription factor WIN1-like ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1-like ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00380 Tryptophan metabolism 4
cit00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
cit00062 Fatty acid elongation 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 4
gma00564 Glycerophospholipid metabolism 4
gma02010 ABC transporters 2
gma00061 Fatty acid biosynthesis 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 3
sly00561 Glycerolipid metabolism 2
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00073 Cutin, suberine and wax biosynthesis 2
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962894 107896090 102626923 102620575 100796962 100794649 100259484 100250826 7485479 7470102 101265036 101258133 101254289 107829873 107805739 4341466 103638685 123141402 123134091 123157531 100840291 100837885
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