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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103838102   beta-carotene isomerase D27, chloroplastic 
 bna-r.1   106366501   beta-carotene isomerase D27, chloroplastic-like 
 bna-r.1   106390256   beta-carotene isomerase D27, chloroplastic 
 bna-r.1   106450614   beta-carotene isomerase D27, chloroplastic 
 ath-u.5   AT1G64680   beta-carotene isomerase D27 
 ghi-r.1   107951144   beta-carotene isomerase D27, chloroplastic 
 ghi-r.1   107950780   beta-carotene isomerase D27, chloroplastic 
 cit-r.1   102631239   beta-carotene isomerase D27, chloroplastic 
 gma-u.5   100780474   beta-carotene isomerase D27, chloroplastic 
 vvi-u.5   100256431   beta-carotene isomerase D27, chloroplastic 
 ppo-u.5   7467036   beta-carotene isomerase D27, chloroplastic 
 mtr-u.5   11426999   beta-carotene isomerase D27, chloroplastic-like 
 sly-u.5   101266539   beta-carotene isomerase D27, chloroplastic 
 sot-r.1   102602280   beta-carotene isomerase D27, chloroplastic 
 nta-r.1   107759732   beta-carotene isomerase D27, chloroplastic 
 nta-r.1   107788269   beta-carotene isomerase D27, chloroplastic 
 osa-u.5   4344507   beta-carotene isomerase D27, chloroplastic-like 
 zma-u.5   100275523   uncharacterized LOC100275523 
 tae-r.2   123172851   beta-carotene isomerase D27, chloroplastic-like 
 tae-r.2   123169134   beta-carotene isomerase D27, chloroplastic 
 tae-r.2   123159827   beta-carotene isomerase D27, chloroplastic-like 
 hvu-r.1   123408633   beta-carotene isomerase D27, chloroplastic 
 sbi-r.1   8066092   beta-carotene isomerase D27, chloroplastic 
 bdi-r.1   100837900   beta-carotene isomerase D27, chloroplastic 
 cre-r.1   CHLRE_16g661150v5   uncharacterized protein 

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Top 50 coexpressed genes to 103838102 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103838102 (bra-r.6 coexpression data)

CoexMap"103838102"


braLOC103838102 | Entrez gene ID : 103838102    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 3 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005506 [list] [network] iron ion binding  (451 genes)  IEA  
Protein XP_009112776.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009112776.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_009112776.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103838102
bna-r.1
for
106366501
bna-r.1
for
106390256
bna-r.1
for
106450614
ath-u.5
for
AT1G64680
ghi-r.1
for
107951144
ghi-r.1
for
107950780
cit-r.1
for
102631239
gma-u.5
for
100780474
vvi-u.5
for
100256431
ppo-u.5
for
7467036
mtr-u.5
for
11426999
sly-u.5
for
101266539
sot-r.1
for
102602280
nta-r.1
for
107759732
nta-r.1
for
107788269
osa-u.5
for
4344507
zma-u.5
for
100275523
tae-r.2
for
123172851
tae-r.2
for
123169134
tae-r.2
for
123159827
hvu-r.1
for
123408633
sbi-r.1
for
8066092
bdi-r.1
for
100837900
cre-r.1
for
CHLRE_16g661150v5


Ortholog ID: 9274
Species bra bna bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103838102 LOC106366501 LOC106390256 LOC106450614 AT1G64680 LOC107951144 LOC107950780 LOC102631239 LOC100780474 LOC100256431 LOC7467036 LOC11426999 LOC101266539 LOC102602280 LOC107759732 LOC107788269 LOC4344507 LOC100275523 LOC123169134 LOC123159827 LOC123147575 LOC123408633 LOC8066092 LOC100837900 CHLRE_16g661150v5
Function* beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27 beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like uncharacterized LOC100275523 beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath01200 Carbon metabolism 4
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00710 Carbon fixation by Calvin cycle 7
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00710 Carbon fixation by Calvin cycle 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00010 Glycolysis / Gluconeogenesis 3
nta00030 Pentose phosphate pathway 3
nta00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838102 106366501 106390256 106450614 842776 107951144 107950780 102631239 100780474 100256431 7467036 11426999 101266539 102602280 107759732 107788269 4344507 100275523 123169134 123159827 123147575 123408633 8066092 100837900 5723425
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