ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103840830	co-chaperone protein p23-1
ath-u.5	AT3G03773	HSP20-like chaperones superfamily protein
ath-u.5	AT4G02450	HSP20-like chaperones superfamily protein
gma-u.5	100819939	co-chaperone protein p23-2
gma-u.5	100798465	co-chaperone protein p23-1
gma-u.5	100796372	uncharacterized LOC100796372
vvi-u.5	100264829	co-chaperone protein p23-1
vvi-u.5	100258848	uncharacterized protein OsI_027940
vvi-u.5	100257397	co-chaperone protein p23-1
ppo-u.5	7464788	co-chaperone protein p23-1
ppo-u.5	7468746	co-chaperone protein p23-1
ppo-u.5	7491059	co-chaperone protein p23-2
mtr-u.5	11432522	uncharacterized protein Os08g0359500
mtr-u.5	25495838	co-chaperone protein p23-2
mtr-u.5	11408847	co-chaperone protein p23-1
sly-u.5	101260189	co-chaperone protein p23-2
sly-u.5	101255970	co-chaperone protein p23-1
sly-u.5	101249490	uncharacterized protein OsI_027940
osa-u.5	4345369	Uncharacterized protein Os08g0359500
osa-u.5	4333609	co-chaperone protein p23-2
osa-u.5	4332979	co-chaperone protein p23-1
zma-u.5	100282216	prostaglandin E synthase 3
zma-u.5	100856929	co-chaperone protein SBA1
zma-u.5	100282592	uncharacterized LOC100282592

Top 50 coexpressed genes to 103840830 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103840830 (bra-r.6 coexpression data)

CoexMap"103840830"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0051131 [list] [network] chaperone-mediated protein complex assembly	(14 genes)	IEA
GO:0006457 [list] [network] protein folding	(249 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(1543 genes)	IEA
GO:0005634 [list] [network] nucleus	(4801 genes)	IEA

GO MF

GO:0051879 [list] [network] Hsp90 protein binding	(14 genes)	IEA
GO:0051087 [list] [network] protein-folding chaperone binding	(94 genes)	IEA

Protein

XP_009115602.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 10

(predict for XP_009115602.1)

Subcellular
localization
TargetP

other 8, mito 4

(predict for XP_009115602.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103840830	ath-u.5 for AT3G03773	ath-u.5 for AT4G02450	gma-u.5 for 100819939	gma-u.5 for 100798465	gma-u.5 for 100796372	vvi-u.5 for 100264829	vvi-u.5 for 100258848	vvi-u.5 for 100257397	ppo-u.5 for 7464788	ppo-u.5 for 7468746	ppo-u.5 for 7491059	mtr-u.5 for 11432522	mtr-u.5 for 25495838	mtr-u.5 for 11408847	sly-u.5 for 101260189	sly-u.5 for 101255970	sly-u.5 for 101249490	osa-u.5 for 4345369	osa-u.5 for 4333609	osa-u.5 for 4332979	zma-u.5 for 100282216	zma-u.5 for 100856929	zma-u.5 for 100282592

Ortholog

Ortholog ID: 1107

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

co-chaperone protein p23-1

co-chaperone protein p23-2

co-chaperone protein p23-1-like

HSP20-like chaperones superfamily protein

co-chaperone protein p23-2

uncharacterized protein OsI_027940

co-chaperone protein p23-1-like

hypothetical protein

co-chaperone protein p23-1

uncharacterized LOC100527476

uncharacterized protein OsI_027940

co-chaperone protein p23-1

co-chaperone protein p23-2

co-chaperone protein p23-1

co-chaperone protein p23-2

uncharacterized protein Os08g0359500

co-chaperone protein p23-1

co-chaperone protein p23-2

uncharacterized protein Os08g0359500-like

uncharacterized protein OsI_027940

uncharacterized protein OsI_027940-like

uncharacterized protein OsI_027940

Uncharacterized protein Os08g0359500

co-chaperone protein p23-2

uncharacterized LOC100282649

co-chaperone protein SBA1

co-chaperone protein p23-2

co-chaperone protein p23-1

uncharacterized protein Os08g0359500

co-chaperone protein p23-2

uncharacterized protein OsI_027940

uncharacterized protein At3g03773

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	10
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2
bna00760	Nicotinate and nicotinamide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	2
cit03040	Spliceosome	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00650	Butanoate metabolism	2
gma01200	Carbon metabolism	2
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	10
vvi03040	Spliceosome	3
vvi04144	Endocytosis	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	3
ppo04626	Plant-pathogen interaction	3
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	9
mtr03020	RNA polymerase	3
mtr03040	Spliceosome	2
mtr03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly03010	Ribosome	3
sly03018	RNA degradation	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta00030	Pentose phosphate pathway	2
nta00480	Glutathione metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03022	Basal transcription factors	3
osa03018	RNA degradation	3
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03082	ATP-dependent chromatin remodeling	3
zma03083	Polycomb repressive complex	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03018	RNA degradation	2
zma03010	Ribosome	2
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	3
tae03008	Ribosome biogenesis in eukaryotes	3
tae03013	Nucleocytoplasmic transport	3
tae03250	Viral life cycle - HIV-1	3
tae00760	Nicotinate and nicotinamide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	7
hvu03018	RNA degradation	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04626	Plant-pathogen interaction	3
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	5
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

103868209

103840830

106445320

106438678

828006

821159

107893773

107917325

102614619

102622672

100798465

100527476

100258848

100257397

7482372

7464788

25495838

11432522

101255970

101260189

102592515

102595594

142179344

107787640

4345369

4333609

100282649

100856929

123087367

123106576

123407183

123446914

8071019

8080752

100831372

100833967

5717998

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Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103840830 (bra-r.6 coexpression data)

Top 50 enrichment test to 103840830 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**