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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939315   protein FAR1-RELATED SEQUENCE 5 
 ghi-r.1   107892212   protein FAR1-RELATED SEQUENCE 7 
 ghi-r.1   107892715   protein FAR1-RELATED SEQUENCE 5 
 cit-r.1   127901362   protein FAR1-RELATED SEQUENCE 5-like 
 cit-r.1   102609258   protein FAR1-RELATED SEQUENCE 12-like 
 gma-u.5   100809803   protein FAR1-RELATED SEQUENCE 5 
 vvi-u.5   100264645   protein FAR1-RELATED SEQUENCE 7 
 vvi-u.5   100267259   protein FAR1-RELATED SEQUENCE 5 
 vvi-u.5   100243567   protein FAR1-RELATED SEQUENCE 12 
 ppo-u.5   7484397   protein FAR1-RELATED SEQUENCE 5 
 nta-r.1   142176082   protein FAR1-RELATED SEQUENCE 7-like 
 osa-u.5   4343903   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123052092   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123092465   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123098678   protein FAR1-RELATED SEQUENCE 5 
 hvu-r.1   123449622   protein FAR1-RELATED SEQUENCE 5-like 
 hvu-r.1   123425307   protein FAR1-RELATED SEQUENCE 5-like 
 bdi-r.1   112271173   protein FAR-RED ELONGATED HYPOCOTYL 3-like 
 bdi-r.1   112270914   protein FAR1-RELATED SEQUENCE 5-like 

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Top 50 coexpressed genes to 107939315 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939315 (ghi-r.1 coexpression data)

CoexMap"103841834"


braLOC103841834 | Entrez gene ID : 103841834    
Species ghi cit gma vvi ppo nta osa tae hvu bdi bra sot zma cre sbi sly ath mtr bna
Paralog 3 2 1 3 1 1 1 3 2 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
Protein XP_033135967.1 [sequence] [blastp]
XP_033135968.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_033135967.1)
nucl 6,  chlo 2,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_033135968.1)
Subcellular
localization
TargetP
other 8  (predict for XP_033135967.1)
scret 9  (predict for XP_033135968.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939315
ghi-r.1
for
107892212
ghi-r.1
for
107892715
cit-r.1
for
127901362
cit-r.1
for
102609258
gma-u.5
for
100809803
vvi-u.5
for
100264645
vvi-u.5
for
100267259
vvi-u.5
for
100243567
ppo-u.5
for
7484397
nta-r.1
for
142176082
osa-u.5
for
4343903
tae-r.2
for
123052092
tae-r.2
for
123092465
tae-r.2
for
123098678
hvu-r.1
for
123449622
hvu-r.1
for
123425307
bdi-r.1
for
112271173
bdi-r.1
for
112270914


Ortholog ID: 353
Species ghi ghi ghi cit cit gma vvi vvi ppo mtr mtr nta osa tae hvu hvu sbi bdi bdi bdi
Symbol LOC107939315 LOC107892715 LOC107888741 LOC102609258 LOC102628390 LOC100809803 LOC100264645 LOC100243567 LOC7484397 LOC112416282 LOC112419843 LOC107802131 LOC4331837 LOC123138333 LOC123449622 LOC123425307 LOC8060682 LOC106866198 LOC104582935 LOC100829961
Function* protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 12-like protein FAR1-RELATED SEQUENCE 7-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939315 107892715 107888741 102609258 102628390 100809803 100264645 100243567 7484397 112416282 112419843 107802131 4331837 123138333 123449622 123425307 8060682 106866198 104582935 100829961
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