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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103858982   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 bna-r.1   125580822   pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like 
 bna-r.1   106438947   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 bna-r.1   106387282   pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like 
 ath-u.5   AT3G02650   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   121212653   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 ghi-r.1   107945265   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 cit-r.1   102611171   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 gma-u.5   100797694   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 gma-u.5   100787612   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 vvi-u.5   100265536   small ribosomal subunit protein mS80 (rPPR6) 
 ppo-u.5   7487529   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 mtr-u.5   25489630   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 mtr-u.5   112421842   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 sly-u.5   101258511   small ribosomal subunit protein mS80 (rPPR6) 
 sot-r.1   102605645   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 nta-r.1   107783603   small ribosomal subunit protein mS80 (rPPR6)-like 
 nta-r.1   107788482   small ribosomal subunit protein mS80 (rPPR6) 
 osa-u.5   4325105   small ribosomal subunit protein mS80 (rPPR6) 
 zma-u.5   100276004   uncharacterized LOC100276004 
 tae-r.2   123062865   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 tae-r.2   123071712   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 tae-r.2   123076409   pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like 
 hvu-r.1   123445061   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 sbi-r.1   8078676   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 
 bdi-r.1   100840903   pentatricopeptide repeat-containing protein At3g02650, mitochondrial 

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Top 50 coexpressed genes to 103858982 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103858982 (bra-r.6 coexpression data)

CoexMap"103843458"


braLOC103843458 | Entrez gene ID : 103843458    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 3 1 2 1 2 1 1 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033139619.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_033139619.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_033139619.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103858982
bna-r.1
for
125580822
bna-r.1
for
106438947
bna-r.1
for
106387282
ath-u.5
for
AT3G02650
ghi-r.1
for
121212653
ghi-r.1
for
107945265
cit-r.1
for
102611171
gma-u.5
for
100797694
gma-u.5
for
100787612
vvi-u.5
for
100265536
ppo-u.5
for
7487529
mtr-u.5
for
25489630
mtr-u.5
for
112421842
sly-u.5
for
101258511
sot-r.1
for
102605645
nta-r.1
for
107783603
nta-r.1
for
107788482
osa-u.5
for
4325105
zma-u.5
for
100276004
tae-r.2
for
123062865
tae-r.2
for
123071712
tae-r.2
for
123076409
hvu-r.1
for
123445061
sbi-r.1
for
8078676
bdi-r.1
for
100840903


Ortholog ID: 8467
Species bra bna bna bna ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103858982 LOC125580822 LOC106438947 LOC106387282 AT3G02650 LOC121212653 LOC107945265 LOC102611171 LOC100797694 LOC100787612 LOC100265536 LOC7487529 LOC25489630 LOC112421842 LOC101258511 LOC102605645 LOC107783603 LOC107788482 LOC4325105 LOC100276004 LOC123062865 LOC123076409 LOC123080058 LOC123445061 LOC8078676 LOC100840903
Function* pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial small ribosomal subunit protein mS80 (rPPR6) pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial small ribosomal subunit protein mS80 (rPPR6) pentatricopeptide repeat-containing protein At3g02650, mitochondrial small ribosomal subunit protein mS80 (rPPR6)-like small ribosomal subunit protein mS80 (rPPR6) small ribosomal subunit protein mS80 (rPPR6) uncharacterized LOC100276004 pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial pentatricopeptide repeat-containing protein At3g02650, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 7
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103858982 125580822 106438947 106387282 821285 121212653 107945265 102611171 100797694 100787612 100265536 7487529 25489630 112421842 101258511 102605645 107783603 107788482 4325105 100276004 123062865 123076409 123080058 123445061 8078676 100840903
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