ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103844988	uncharacterized LOC103844988
bra-r.6	103846651	vacuolar protein sorting-associated protein 13-like protein
bra-r.6	103856983	uncharacterized LOC103856983
bra-r.6	103871340	uncharacterized LOC103871340
bna-r.1	106371409	uncharacterized LOC106371409
bna-r.1	BNAC03G14160D	uncharacterized BNAC03G14160D
bna-r.1	106406382	uncharacterized LOC106406382
ath-u.5	AT5G12300	Calcium-dependent lipid-binding (CaLB domain) family protein
ath-u.5	AT5G55530	Calcium-dependent lipid-binding (CaLB domain) family protein
ghi-r.1	107903433	uncharacterized LOC107903433
ghi-r.1	107906710	uncharacterized LOC107906710
ghi-r.1	107917825	uncharacterized LOC107917825
cit-r.1	102609263	uncharacterized LOC102609263
cit-r.1	102624978	uncharacterized LOC102624978
cit-r.1	102619707	protein SRC2-like
gma-u.5	100816806	uncharacterized LOC100816806
gma-u.5	100775760	uncharacterized LOC100775760
gma-u.5	100781587	uncharacterized LOC100781587
vvi-u.5	100249395	uncharacterized LOC100249395
vvi-u.5	100262283	uncharacterized LOC100262283
vvi-u.5	100255166	uncharacterized LOC100255166
ppo-u.5	7485082	uncharacterized LOC7485082
ppo-u.5	7475022	uncharacterized LOC7475022
ppo-u.5	7463888	uncharacterized LOC7463888
mtr-u.5	11444832	uncharacterized LOC11444832
mtr-u.5	120579310	uncharacterized LOC120579310
mtr-u.5	11427373	uncharacterized LOC11427373
sly-u.5	101254920	uncharacterized LOC101254920
sly-u.5	101250320	uncharacterized LOC101250320
sly-u.5	101260399	uncharacterized LOC101260399
sot-r.1	102599017	uncharacterized LOC102599017
sot-r.1	102592665	uncharacterized LOC102592665
sot-r.1	102590556	uncharacterized LOC102590556
nta-r.1	107791969	uncharacterized LOC107791969
nta-r.1	107784633	uncharacterized LOC107784633
osa-u.5	4325399	uncharacterized LOC4325399
osa-u.5	4331924	uncharacterized LOC4331924
zma-u.5	100381690	Calcium-dependent lipid-binding (CaLB domain) family protein
zma-u.5	118473497	uncharacterized LOC118473497
zma-u.5	107196794	Calcium-dependent lipid-binding (CaLB domain) family protein
tae-r.2	123093148	uncharacterized LOC123093148
tae-r.2	123059398	uncharacterized LOC123059398
tae-r.2	123072533	uncharacterized LOC123072533
hvu-r.1	123440974	uncharacterized LOC123440974
hvu-r.1	123449449	uncharacterized LOC123449449
sbi-r.1	8077369	uncharacterized LOC8077369
sbi-r.1	110429803	uncharacterized LOC110429803
bdi-r.1	100822429	uncharacterized LOC100822429

Top 50 coexpressed genes to 103844988 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103844988 (bra-r.6 coexpression data)

CoexMap"103844988"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_009120061.1 [sequence] [blastp]
XP_009120062.1 [sequence] [blastp]
XP_009120063.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, vacu 1	(predict for XP_009120061.1)
nucl 9, chlo 1, vacu 1	(predict for XP_009120062.1)
nucl 9, chlo 1, vacu 1	(predict for XP_009120063.1)

Subcellular
localization
TargetP

chlo 6, other 6	(predict for XP_009120061.1)
chlo 6, other 6	(predict for XP_009120062.1)
chlo 6, other 6	(predict for XP_009120063.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103844988	bra-r.6 for 103846651	bra-r.6 for 103856983	bra-r.6 for 103871340	bna-r.1 for 106371409	bna-r.1 for BNAC03G14160D	bna-r.1 for 106406382	ath-u.5 for AT5G12300	ath-u.5 for AT5G55530	ghi-r.1 for 107903433	ghi-r.1 for 107906710	ghi-r.1 for 107917825	cit-r.1 for 102609263	cit-r.1 for 102624978	cit-r.1 for 102619707	gma-u.5 for 100816806	gma-u.5 for 100775760	gma-u.5 for 100781587	vvi-u.5 for 100249395	vvi-u.5 for 100262283	vvi-u.5 for 100255166	ppo-u.5 for 7485082	ppo-u.5 for 7475022	ppo-u.5 for 7463888	mtr-u.5 for 11444832	mtr-u.5 for 120579310	mtr-u.5 for 11427373	sly-u.5 for 101254920	sly-u.5 for 101250320	sly-u.5 for 101260399	sot-r.1 for 102599017	sot-r.1 for 102592665	sot-r.1 for 102590556	nta-r.1 for 107791969	nta-r.1 for 107784633	osa-u.5 for 4325399	osa-u.5 for 4331924	zma-u.5 for 100381690	zma-u.5 for 118473497	zma-u.5 for 107196794	tae-r.2 for 123093148	tae-r.2 for 123059398	tae-r.2 for 123072533	hvu-r.1 for 123440974	hvu-r.1 for 123449449	sbi-r.1 for 8077369	sbi-r.1 for 110429803	bdi-r.1 for 100822429

Ortholog

Ortholog ID: 1675

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC103844988

uncharacterized LOC103856983

uncharacterized LOC103871340

uncharacterized BNAC03G14160D

uncharacterized LOC111211578

uncharacterized BNAC09G44430D

Calcium-dependent lipid-binding (CaLB domain) family protein

uncharacterized LOC107917825

uncharacterized LOC107922005

uncharacterized LOC107932787

uncharacterized LOC102609263

uncharacterized LOC102624978

protein SRC2-like

uncharacterized LOC100775760

uncharacterized LOC100781587

uncharacterized LOC100814102

uncharacterized LOC100249395

uncharacterized LOC100262283

uncharacterized LOC100255166

uncharacterized LOC7485082

uncharacterized LOC7475022

uncharacterized LOC7463888

uncharacterized LOC11444832

uncharacterized LOC120579310

uncharacterized LOC11427373

uncharacterized LOC101254920

uncharacterized LOC101250320

uncharacterized LOC101260399

uncharacterized LOC102599017

uncharacterized LOC102592665

uncharacterized LOC102590556

uncharacterized LOC107767325

uncharacterized LOC107762950

uncharacterized LOC4325399

uncharacterized LOC4331924

uncharacterized LOC118473497

Calcium-dependent lipid-binding (CaLB domain) family protein

uncharacterized LOC100280161

uncharacterized LOC123093148

uncharacterized LOC123072533

uncharacterized LOC123075706

uncharacterized LOC123440974

uncharacterized LOC123449449

uncharacterized LOC8077369

uncharacterized LOC110429803

uncharacterized LOC100822429

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00053	Ascorbate and aldarate metabolism	3
bna00480	Glutathione metabolism	3
bna00020	Citrate cycle (TCA cycle)	2
bna00270	Cysteine and methionine metabolism	2
bna00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00053	Ascorbate and aldarate metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi01240	Biosynthesis of cofactors	4
ghi01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00410	beta-Alanine metabolism	2
gma00430	Taurine and hypotaurine metabolism	2
gma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	3
ppo03410	Base excision repair	2
ppo00071	Fatty acid degradation	2
ppo00620	Pyruvate metabolism	2
ppo00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00670	One carbon pool by folate	8
ppo01230	Biosynthesis of amino acids	8
ppo01240	Biosynthesis of cofactors	5
ppo00270	Cysteine and methionine metabolism	5
ppo00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	3
sly03082	ATP-dependent chromatin remodeling	2
sly00290	Valine, leucine and isoleucine biosynthesis	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	2
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	6
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00510	N-Glycan biosynthesis	4
tae00513	Various types of N-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	4
sbi00941	Flavonoid biosynthesis	3
sbi00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3
sbi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

103844988

103856983

103871340

106345986

111211578

106424610

835647

841478

107917825

107922005

107932787

102609263

102624978

102619707

100775760

100781587

100814102

100249395

100262283

100255166

7485082

7475022

7463888

11444832

120579310

11427373

101254920

101250320

101260399

102599017

102592665

102590556

107767325

107762950

4325399

4331924

118473497

107196794

100280161

123093148

123072533

123075706

123440974

123449449

8077369

110429803

100822429

The preparation time of this page was 0.5 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	3	3	3	3	2	2	3	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103844988 (bra-r.6 coexpression data)

Top 50 enrichment test to 103844988 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**