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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103845047   THO complex subunit 3 
 bna-r.1   106385055   THO complex subunit 3 
 bna-r.1   106397248   THO complex subunit 3 
 ath-u.5   TEX1   Transducin/WD40 repeat-like superfamily protein 
 ghi-r.1   107903400   THO complex subunit 3 
 ghi-r.1   107931189   THO complex subunit 3 
 cit-r.1   102626591   THO complex subunit 3 
 gma-u.5   100812126   THO complex subunit 3 
 gma-u.5   100782507   THO complex subunit 3 
 vvi-u.5   100241262   THO complex subunit 3 
 ppo-u.5   7457665   THO complex subunit 3 
 mtr-u.5   11438034   THO complex subunit 3 
 sly-u.5   101265940   THO complex subunit 3 
 sot-r.1   102597071   THO complex subunit 3 
 nta-r.1   107784599   THO complex subunit 3 
 nta-r.1   107759125   THO complex subunit 3 
 osa-u.5   4346657   THO complex subunit 3 
 zma-u.5   100272607   uncharacterized LOC100272607 
 tae-r.2   123111657   THO complex subunit 3 
 tae-r.2   123121123   THO complex subunit 3 
 tae-r.2   123103455   THO complex subunit 3 
 hvu-r.1   123398371   THO complex subunit 3 
 sbi-r.1   8071866   THO complex subunit 3 
 bdi-r.1   100838230   THO complex subunit 3 
 cre-r.1   CHLRE_12g559850v5   uncharacterized protein 

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Top 50 coexpressed genes to 103845047 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103845047 (bra-r.6 coexpression data)

CoexMap"103845047"


braLOC103845047 | Entrez gene ID : 103845047    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03013 [list] [network] Nucleocytoplasmic transport (160 genes)
brp03040 [list] [network] Spliceosome (434 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (44 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (6 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009120124.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_009120124.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009120124.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103845047
bna-r.1
for
106385055
bna-r.1
for
106397248
ath-u.5
for
TEX1
ghi-r.1
for
107903400
ghi-r.1
for
107931189
cit-r.1
for
102626591
gma-u.5
for
100812126
gma-u.5
for
100782507
vvi-u.5
for
100241262
ppo-u.5
for
7457665
mtr-u.5
for
11438034
sly-u.5
for
101265940
sot-r.1
for
102597071
nta-r.1
for
107784599
nta-r.1
for
107759125
osa-u.5
for
4346657
zma-u.5
for
100272607
tae-r.2
for
123111657
tae-r.2
for
123121123
tae-r.2
for
123103455
hvu-r.1
for
123398371
sbi-r.1
for
8071866
bdi-r.1
for
100838230
cre-r.1
for
CHLRE_12g559850v5


Ortholog ID: 10399
Species bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103845047 LOC106385055 LOC106397248 TEX1 LOC107903400 LOC107931189 LOC102626591 LOC100812126 LOC100782507 LOC100241262 LOC7457665 LOC11438034 LOC101265940 LOC102597071 LOC107784599 LOC107759125 LOC4346657 LOC100272607 LOC123111657 LOC123121123 LOC123103455 LOC123398371 LOC8071866 LOC100838230 CHLRE_12g559850v5
Function* THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 Transducin/WD40 repeat-like superfamily protein THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 uncharacterized LOC100272607 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
bna00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03018 RNA degradation 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03050 Proteasome 2
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03010 Ribosome 3
mtr03050 Proteasome 3
mtr03018 RNA degradation 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta00564 Glycerophospholipid metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00564 Glycerophospholipid metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03010 Ribosome 5
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03010 Ribosome 4
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 3
tae03010 Ribosome 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103845047 106385055 106397248 835712 107903400 107931189 102626591 100812126 100782507 100241262 7457665 11438034 101265940 102597071 107784599 107759125 4346657 100272607 123111657 123121123 123103455 123398371 8071866 100838230 5728678
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