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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103846427   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 bra-r.6   103836478   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic 
 bra-r.6   103844041   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic 
 bra-r.6   103867923   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 bna-r.1   106424637   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 bna-r.1   106400603   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic 
 bna-r.1   111213571   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic 
 ath-u.5   VAR2   FtsH extracellular protease family 
 ath-u.5   FTSH8   FTSH protease 8 
 ghi-r.1   121213707   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 ghi-r.1   107960354   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ghi-r.1   107937397   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 cit-r.1   102623114   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 cit-r.1   102613766   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like 
 gma-u.5   100788601   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 gma-u.5   FTSH9   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic-like 
 vvi-u.5   100250511   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 vvi-u.5   100266289   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ppo-u.5   18096512   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 ppo-u.5   7495977   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ppo-u.5   7457995   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 mtr-u.5   25488224   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 mtr-u.5   25493413   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sly-u.5   101266739   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sly-u.5   ftsH6   FtsH protease 
 sot-r.1   102603811   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 sot-r.1   102580747   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 nta-r.1   107795979   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 nta-r.1   107821650   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 nta-r.1   107762804   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 osa-u.5   4341796   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like 
 osa-u.5   4340563   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like 
 zma-u.5   100191560   ftsH6-Zea mays FtsH protease 
 zma-u.5   100147735   filamentation temperature-sensitive H 2B 
 zma-u.5   100147734   uncharacterized LOC100147734 
 tae-r.2   123149152   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 tae-r.2   123159943   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 tae-r.2   123161268   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 hvu-r.1   123407214   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sbi-r.1   110430892   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sbi-r.1   8081292   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 bdi-r.1   100832622   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 bdi-r.1   100834087   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 cre-r.1   CHLRE_17g720050v5   uncharacterized protein 

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Top 50 coexpressed genes to 103846427 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103846427 (bra-r.6 coexpression data)

CoexMap"103846427"


braLOC103846427 | Entrez gene ID : 103846427    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 2 2 3 2 2 2 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (1243 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (183 genes)  IEA  
GO:0016020 [list] [network] membrane  (4714 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (46 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (72 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (641 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
Protein XP_009121594.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_009121594.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_009121594.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103846427
bra-r.6
for
103836478
bra-r.6
for
103844041
bra-r.6
for
103867923
bna-r.1
for
106424637
bna-r.1
for
106400603
bna-r.1
for
111213571
ath-u.5
for
VAR2
ath-u.5
for
FTSH8
ghi-r.1
for
121213707
ghi-r.1
for
107960354
ghi-r.1
for
107937397
cit-r.1
for
102623114
cit-r.1
for
102613766
gma-u.5
for
100788601
gma-u.5
for
FTSH9
vvi-u.5
for
100250511
vvi-u.5
for
100266289
ppo-u.5
for
18096512
ppo-u.5
for
7495977
ppo-u.5
for
7457995
mtr-u.5
for
25488224
mtr-u.5
for
25493413
sly-u.5
for
101266739
sly-u.5
for
ftsH6
sot-r.1
for
102603811
sot-r.1
for
102580747
nta-r.1
for
107795979
nta-r.1
for
107821650
nta-r.1
for
107762804
osa-u.5
for
4341796
osa-u.5
for
4340563
zma-u.5
for
100191560
zma-u.5
for
100147735
zma-u.5
for
100147734
tae-r.2
for
123149152
tae-r.2
for
123159943
tae-r.2
for
123161268
hvu-r.1
for
123407214
sbi-r.1
for
110430892
sbi-r.1
for
8081292
bdi-r.1
for
100832622
bdi-r.1
for
100834087
cre-r.1
for
CHLRE_17g720050v5


Ortholog ID: 2393
Species bra bra bra bna bna ath ath ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC103846427 LOC103836478 LOC103867923 LOC106424637 LOC111213571 VAR2 FTSH8 LOC121213707 LOC107960354 LOC107937397 LOC102623114 LOC102613766 LOC100788601 LOC100800550 LOC100250511 LOC100266289 LOC18096512 LOC7495977 LOC7457995 LOC25488224 LOC25493413 LOC101266739 ftsH6 LOC102603811 LOC102580747 LOC107795979 LOC107821650 LOC107827004 LOC4341796 LOC4340563 LOC100191560 LOC100147735 LOC100147734 LOC123149152 LOC123164751 LOC123165258 LOC123407214 LOC110430892 LOC8081292 LOC100832622 LOC100834087 CHLRE_17g720050v5
Function* ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 8, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 8, chloroplastic FtsH extracellular protease family FTSH protease 8 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic FtsH protease ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like ftsH6-Zea mays FtsH protease filamentation temperature-sensitive H 2B uncharacterized LOC100147734 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 9
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra01230 Biosynthesis of amino acids 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00710 Carbon fixation by Calvin cycle 4
bra00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 9
cit03040 Spliceosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00360 Phenylalanine metabolism 3
gma00650 Butanoate metabolism 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00052 Galactose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi03040 Spliceosome 3
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03018 RNA degradation 4
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 15
sly03040 Spliceosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 16
sot03040 Spliceosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 2
osa00620 Pyruvate metabolism 2
osa01200 Carbon metabolism 2
osa00566 Sulfoquinovose metabolism 2
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03040 Spliceosome 3
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00053 Ascorbate and aldarate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00010 Glycolysis / Gluconeogenesis 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103846427 103836478 103867923 106424637 111213571 817646 837154 121213707 107960354 107937397 102623114 102613766 100788601 100800550 100250511 100266289 18096512 7495977 7457995 25488224 25493413 101266739 778337 102603811 102580747 107795979 107821650 107827004 4341796 4340563 100191560 100147735 100147734 123149152 123164751 123165258 123407214 110430892 8081292 100832622 100834087 5722667
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