ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103849167	uncharacterized LOC103849167
bra-r.6	103854583	increased DNA methylation 1
bna-r.1	111206226	increased DNA methylation 1
bna-r.1	125607873	uncharacterized LOC125607873
bna-r.1	106346579	uncharacterized LOC106346579
ath-u.5	AT4G14920	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
ath-u.5	AT5G36670	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT5G36740	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
ghi-r.1	107951295	uncharacterized LOC107951295
ghi-r.1	107914709	uncharacterized LOC107914709
ghi-r.1	107951769	uncharacterized LOC107951769
cit-r.1	102609112	uncharacterized LOC102609112
cit-r.1	102627500	uncharacterized LOC102627500
gma-u.5	100801863	uncharacterized LOC100801863
gma-u.5	100801320	increased DNA methylation 1
gma-u.5	100784172	uncharacterized LOC100784172
vvi-u.5	100853644	uncharacterized LOC100853644
vvi-u.5	100247619	uncharacterized LOC100247619
ppo-u.5	7498079	uncharacterized LOC7498079
ppo-u.5	7467487	uncharacterized LOC7467487
ppo-u.5	7464840	uncharacterized LOC7464840
mtr-u.5	25485216	uncharacterized LOC25485216
mtr-u.5	11420802	uncharacterized LOC11420802
sly-u.5	101268353	uncharacterized LOC101268353
sly-u.5	101262957	uncharacterized LOC101262957
sly-u.5	101253531	uncharacterized LOC101253531
sot-r.1	102580909	uncharacterized LOC102580909
sot-r.1	102586736	uncharacterized LOC102586736
sot-r.1	102591131	uncharacterized LOC102591131
nta-r.1	107791595	uncharacterized LOC107791595
nta-r.1	107822865	increased DNA methylation 1
nta-r.1	107814210	uncharacterized LOC107814210
osa-u.5	4334099	uncharacterized LOC4334099
osa-u.5	4342524	uncharacterized LOC4342524
zma-u.5	103625887	uncharacterized LOC103625887
zma-u.5	103631995	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
zma-u.5	100272699	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
tae-r.2	123044837	uncharacterized LOC123044837
tae-r.2	123052688	uncharacterized LOC123052688
hvu-r.1	123426104	uncharacterized LOC123426104
hvu-r.1	123452214	uncharacterized LOC123452214
sbi-r.1	8085941	uncharacterized LOC8085941
sbi-r.1	8081181	uncharacterized LOC8081181
bdi-r.1	100845556	uncharacterized LOC100845556
bdi-r.1	100827015	uncharacterized LOC100827015

Top 50 coexpressed genes to 103849167 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103849167 (bra-r.6 coexpression data)

CoexMap"103849167"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045892 [list] [network] negative regulation of DNA-templated transcription

(113 genes)

IEA

GO CC

GO MF

GO:0003714 [list] [network] transcription corepressor activity	(49 genes)	IEA
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups	(478 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3159 genes)	IEA

Protein

XP_009124221.2 [sequence] [blastp]
XP_009124222.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for XP_009124221.2)
nucl 9, cyto_nucl 5	(predict for XP_009124222.2)

Subcellular
localization
TargetP

other 8	(predict for XP_009124221.2)
other 8	(predict for XP_009124222.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103849167	bra-r.6 for 103854583	bna-r.1 for 111206226	bna-r.1 for 125607873	bna-r.1 for 106346579	ath-u.5 for AT4G14920	ath-u.5 for AT5G36670	ath-u.5 for AT5G36740	ghi-r.1 for 107951295	ghi-r.1 for 107914709	ghi-r.1 for 107951769	cit-r.1 for 102609112	cit-r.1 for 102627500	gma-u.5 for 100801863	gma-u.5 for 100801320	gma-u.5 for 100784172	vvi-u.5 for 100853644	vvi-u.5 for 100247619	ppo-u.5 for 7498079	ppo-u.5 for 7467487	ppo-u.5 for 7464840	mtr-u.5 for 25485216	mtr-u.5 for 11420802	sly-u.5 for 101268353	sly-u.5 for 101262957	sly-u.5 for 101253531	sot-r.1 for 102580909	sot-r.1 for 102586736	sot-r.1 for 102591131	nta-r.1 for 107791595	nta-r.1 for 107822865	nta-r.1 for 107814210	osa-u.5 for 4334099	osa-u.5 for 4342524	zma-u.5 for 103625887	zma-u.5 for 103631995	zma-u.5 for 100272699	tae-r.2 for 123044837	tae-r.2 for 123052688	hvu-r.1 for 123426104	hvu-r.1 for 123452214	sbi-r.1 for 8085941	sbi-r.1 for 8081181	bdi-r.1 for 100845556	bdi-r.1 for 100827015

Ortholog

Ortholog ID: 2285

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC103849167

increased DNA methylation 1

uncharacterized LOC106346579

increased DNA methylation 1

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

RING/FYVE/PHD zinc finger superfamily protein

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

uncharacterized LOC107951295

uncharacterized LOC107951769

uncharacterized LOC107927751

uncharacterized LOC102609112

uncharacterized LOC102627500

uncharacterized LOC100801863

increased DNA methylation 1

uncharacterized LOC100784172

uncharacterized LOC100853644

uncharacterized LOC100247619

uncharacterized LOC7498079

uncharacterized LOC7464840

uncharacterized LOC7480692

uncharacterized LOC25485216

uncharacterized LOC11420802

uncharacterized LOC101268353

uncharacterized LOC101262957

uncharacterized LOC101253531

uncharacterized LOC102580909

uncharacterized LOC102586736

uncharacterized LOC102591131

increased DNA methylation 1

uncharacterized LOC107814210

uncharacterized LOC107832321

uncharacterized LOC4334099

uncharacterized LOC4342524

uncharacterized LOC103625887

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

uncharacterized LOC123122813

uncharacterized LOC123188568

uncharacterized LOC123113303

uncharacterized LOC123426104

uncharacterized LOC123452214

uncharacterized LOC8085941

uncharacterized LOC8081181

uncharacterized LOC100845556

uncharacterized LOC100827015

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3
sly04144	Endocytosis	3
sly05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03083	Polycomb repressive complex	2
sly03250	Viral life cycle - HIV-1	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04120	Ubiquitin mediated proteolysis	2
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3

Expression

Expression pattern

Entrez Gene ID^*

103849167

103854583

111206226

106346579

106371194

827150

833632

833643

107951295

107951769

107927751

102609112

102627500

100801863

100801320

100784172

100853644

100247619

7498079

7464840

7480692

25485216

11420802

101268353

101262957

101253531

102580909

102586736

102591131

107822865

107814210

107832321

4334099

4342524

103625887

103631995

100272699

123122813

123188568

123113303

123426104

123452214

8085941

8081181

100845556

100827015

The preparation time of this page was 0.1 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	3	3	2	3	2	3	2	3	3	3	2	3	2	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103849167 (bra-r.6 coexpression data)

Top 50 enrichment test to 103849167 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**