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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103851216   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 bna-r.1   106431468   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 bna-r.1   125575036   DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like 
 ath-u.5   AT5G19210   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ghi-r.1   107914884   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 ghi-r.1   107897693   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 cit-r.1   102611725   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 gma-u.5   100786205   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 vvi-u.5   100257883   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 ppo-u.5   7474228   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 mtr-u.5   11443130   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 mtr-u.5   120575731   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 sly-u.5   101250731   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 sot-r.1   102583081   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 nta-r.1   107806493   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 nta-r.1   107775557   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 osa-u.5   4323839   DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like 
 zma-u.5   100281356   ATP binding protein 
 tae-r.2   123080976   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 tae-r.2   123072809   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 hvu-r.1   123445677   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 sbi-r.1   110433946   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 
 bdi-r.1   100833781   DEAD-box ATP-dependent RNA helicase 58, chloroplastic 

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Top 50 coexpressed genes to 103851216 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103851216 (bra-r.6 coexpression data)

CoexMap"103851216"


braLOC103851216 | Entrez gene ID : 103851216    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 2 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (92 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
Protein XP_009126308.1 [sequence] [blastp]
XP_009126309.1 [sequence] [blastp]
XP_033141691.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009126308.1)
cyto 3,  chlo 2,  cyto_nucl 2,  cyto_plas 2  (predict for XP_009126309.1)
chlo 9  (predict for XP_033141691.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_009126308.1)
other 8  (predict for XP_009126309.1)
chlo 8  (predict for XP_033141691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103851216
bna-r.1
for
106431468
bna-r.1
for
125575036
ath-u.5
for
AT5G19210
ghi-r.1
for
107914884
ghi-r.1
for
107897693
cit-r.1
for
102611725
gma-u.5
for
100786205
vvi-u.5
for
100257883
ppo-u.5
for
7474228
mtr-u.5
for
11443130
mtr-u.5
for
120575731
sly-u.5
for
101250731
sot-r.1
for
102583081
nta-r.1
for
107806493
nta-r.1
for
107775557
osa-u.5
for
4323839
zma-u.5
for
100281356
tae-r.2
for
123080976
tae-r.2
for
123072809
hvu-r.1
for
123445677
sbi-r.1
for
110433946
bdi-r.1
for
100833781


Ortholog ID: 11416
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103851216 LOC106431468 LOC125575036 AT5G19210 LOC107914884 LOC107897693 LOC102611725 LOC100786205 LOC100257883 LOC7474228 LOC11443130 LOC120575731 LOC101250731 LOC102583081 LOC107806493 LOC107775557 LOC4323839 LOC100281356 LOC123080976 LOC123072809 LOC123445677 LOC110433946 LOC100833781
Function* DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like ATP binding protein DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic DEAD-box ATP-dependent RNA helicase 58, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 4
ghi04148 Efferocytosis 4
ghi04517 IgSF CAM signaling 4
ghi04518 Integrin signaling 4
ghi04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00280 Valine, leucine and isoleucine degradation 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 3
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103851216 106431468 125575036 832041 107914884 107897693 102611725 100786205 100257883 7474228 11443130 120575731 101250731 102583081 107806493 107775557 4323839 100281356 123080976 123072809 123445677 110433946 100833781
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