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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103852474   pentatricopeptide repeat-containing protein At4g30700 
 bra-r.6   103862163   pentatricopeptide repeat-containing protein At4g30700 
 bra-r.6   103852396   pentatricopeptide repeat-containing protein At4g30700 
 bna-r.1   106441105   pentatricopeptide repeat-containing protein At4g30700-like 
 bna-r.1   106411022   pentatricopeptide repeat-containing protein At4g30700-like 
 bna-r.1   106394072   pentatricopeptide repeat-containing protein At4g30700-like 
 ath-u.5   MEF29   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107958682   pentatricopeptide repeat-containing protein At4g30700 
 ghi-r.1   107907452   pentatricopeptide repeat-containing protein At4g30700 
 cit-r.1   102621469   pentatricopeptide repeat-containing protein At4g30700 
 gma-u.5   100795074   pentatricopeptide repeat-containing protein At4g30700 
 vvi-u.5   100243341   pentatricopeptide repeat-containing protein At4g30700 
 ppo-u.5   7465970   pentatricopeptide repeat-containing protein At4g30700 
 mtr-u.5   11437873   pentatricopeptide repeat-containing protein At4g30700 
 sot-r.1   102578504   pentatricopeptide repeat-containing protein At4g30700 
 nta-r.1   107769134   pentatricopeptide repeat-containing protein At4g30700-like 
 nta-r.1   107806629   pentatricopeptide repeat-containing protein At4g30700-like 
 zma-u.5   103637971   pentatricopeptide repeat-containing protein At4g30700 
 hvu-r.1   123411988   pentatricopeptide repeat-containing protein At4g30700 
 bdi-r.1   100846566   pentatricopeptide repeat-containing protein At4g30700 

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Top 50 coexpressed genes to 103852474 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103852474 (bra-r.6 coexpression data)

CoexMap"103852474"


braLOC103852474 | Entrez gene ID : 103852474    
Species bra bna ath ghi cit gma vvi ppo mtr sot nta zma hvu bdi sly osa tae cre sbi
Paralog 3 3 1 2 1 1 1 1 1 1 2 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033130700.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_033130700.1)
Subcellular
localization
TargetP
scret 3,  other 3  (predict for XP_033130700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103852474
bra-r.6
for
103862163
bra-r.6
for
103852396
bna-r.1
for
106441105
bna-r.1
for
106411022
bna-r.1
for
106394072
ath-u.5
for
MEF29
ghi-r.1
for
107958682
ghi-r.1
for
107907452
cit-r.1
for
102621469
gma-u.5
for
100795074
vvi-u.5
for
100243341
ppo-u.5
for
7465970
mtr-u.5
for
11437873
sot-r.1
for
102578504
nta-r.1
for
107769134
nta-r.1
for
107806629
zma-u.5
for
103637971
hvu-r.1
for
123411988
bdi-r.1
for
100846566


Ortholog ID: 9054
Species bra bra bra bna bna bna ath ghi ghi cit gma vvi ppo mtr sot nta nta zma hvu bdi
Symbol LOC103852474 LOC103862163 LOC103852396 LOC106441105 LOC106411022 LOC106393980 MEF29 LOC107958682 LOC107907452 LOC102621469 LOC100795074 LOC100243341 LOC7465970 LOC11437873 LOC102578504 LOC107769134 LOC107806629 LOC103637971 LOC123411988 LOC100846566
Function* pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103852474 103862163 103852396 106441105 106411022 106393980 829193 107958682 107907452 102621469 100795074 100243341 7465970 11437873 102578504 107769134 107806629 103637971 123411988 100846566
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