ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103854227	golgin candidate 6
ath-u.5	GC6	golgin Putative 6
gma-u.5	100793920	golgin candidate 6
gma-u.5	100785792	golgin candidate 6
vvi-u.5	100266995	golgin candidate 6
ppo-u.5	7467647	golgin candidate 6
mtr-u.5	25495117	golgin candidate 6
sly-u.5	101261780	golgin candidate 6-like
sly-u.5	101249393	golgin candidate 6
osa-u.5	4352428	golgin candidate 6
zma-u.5	103640962	golgin candidate 6
zma-u.5	100273672	uncharacterized LOC100273672

functional annotation

KEGG

GO BP

GO:0045056 [list] [network] transcytosis	(2 genes)	IEA
GO:0048211 [list] [network] Golgi vesicle docking	(2 genes)	IEA
GO:0048280 [list] [network] vesicle fusion with Golgi apparatus	(7 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(152 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(422 genes)	IEA

GO CC

GO:0005795 [list] [network] Golgi stack	(15 genes)	IEA
GO:0012507 [list] [network] ER to Golgi transport vesicle membrane	(48 genes)	IEA
GO:0000139 [list] [network] Golgi membrane	(127 genes)	IEA
GO:0005783 [list] [network] endoplasmic reticulum	(778 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(7940 genes)	IEA

GO MF

Protein

XP_009129406.2 [sequence] [blastp]
XP_009129407.2 [sequence] [blastp]
XP_009129408.1 [sequence] [blastp]
XP_009129409.2 [sequence] [blastp]
XP_033140203.1 [sequence] [blastp]
XP_033140204.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 2, cyto 2	(predict for XP_009129406.2)
nucl 5, chlo 2, cyto 2	(predict for XP_009129407.2)
nucl 4, chlo 3, cyto 2, cysk_nucl 2	(predict for XP_009129408.1)
nucl 5, cyto 3, chlo 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_009129409.2)
chlo 4, nucl 2, plas 1, vacu 1, E.R. 1, pero 1, golg 1, E.R._vacu 1, cysk_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_033140203.1)
chlo 4, nucl 2, plas 1, vacu 1, E.R. 1, pero 1, golg 1, E.R._vacu 1, cysk_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_033140204.1)

Subcellular
localization
TargetP

other 5	(predict for XP_009129406.2)
other 5	(predict for XP_009129407.2)
other 5	(predict for XP_009129408.1)
other 8	(predict for XP_009129409.2)
other 5	(predict for XP_033140203.1)
other 5	(predict for XP_033140204.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103854227	ath-u.5 for GC6	gma-u.5 for 100793920	gma-u.5 for 100785792	vvi-u.5 for 100266995	ppo-u.5 for 7467647	mtr-u.5 for 25495117	sly-u.5 for 101261780	sly-u.5 for 101249393	osa-u.5 for 4352428	zma-u.5 for 103640962	zma-u.5 for 100273672

Ortholog ID: 6886

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

GC6

Function^*

golgin candidate 6

golgin candidate 6-like

golgin candidate 6

golgin Putative 6

golgin candidate 6

uncharacterized LOC100273672

golgin candidate 6

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00350	Tyrosine metabolism	3
bra00280	Valine, leucine and isoleucine degradation	2
bra00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03013	Nucleocytoplasmic transport	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03013	Nucleocytoplasmic transport	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2
ppo04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	6
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	4
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	2
tae00592	alpha-Linolenic acid metabolism	2
tae01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

103875209

103854227

106401792

106382129

822375

107926045

107897897

102612836

100793920

100785792

100266995

7467647

25495117

101249393

102587239

107806804

107824297

4352428

100273672

103640962

123110814

123102630

123395601

8066305

100832173

5721824

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103854227 (bra-r.6 coexpression data)

Top 50 enrichment test to 103854227 (bra-r.6 coexpression data)


Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	2	1	1	1	2	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103854227 (bra-r.6 coexpression data)

Top 50 enrichment test to 103854227 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**