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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103855879   HBS1-like protein 
 ath-u.5   AT5G10630   Translation elongation factor EF1A/initiation factor IF2gamma family protein 
 gma-u.5   100801724   elongation factor 1-alpha 
 gma-u.5   100798594   HBS1-like protein 
 vvi-u.5   100262342   uncharacterized LOC100262342 
 ppo-u.5   7458736   uncharacterized LOC7458736 
 ppo-u.5   18100762   uncharacterized LOC18100762 
 mtr-u.5   11406169   elongation factor 1-alpha 
 sly-u.5   101264306   uncharacterized LOC101264306 
 sly-u.5   101256564   uncharacterized LOC101256564 
 osa-u.5   4337409   uncharacterized LOC4337409 
 osa-u.5   4336848   uncharacterized LOC4336848 
 osa-u.5   4326095   uncharacterized LOC4326095 
 zma-u.5   103645758   HBS1-like protein 
 zma-u.5   103642014   HBS1-like protein 

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Top 50 coexpressed genes to 103855879 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103855879 (bra-r.6 coexpression data)

CoexMap"103855879"


braLOC103855879 | Entrez gene ID : 103855879    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03015 [list] [network] mRNA surveillance pathway (205 genes)
GO BP
GO:0006412 [list] [network] translation  (893 genes)  IEA  
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (332 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (380 genes)  IEA  
Protein XP_009131172.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_009131172.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009131172.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103855879
ath-u.5
for
AT5G10630
gma-u.5
for
100801724
gma-u.5
for
100798594
vvi-u.5
for
100262342
ppo-u.5
for
7458736
ppo-u.5
for
18100762
mtr-u.5
for
11406169
sly-u.5
for
101264306
sly-u.5
for
101256564
osa-u.5
for
4337409
osa-u.5
for
4336848
osa-u.5
for
4326095
zma-u.5
for
103645758
zma-u.5
for
103642014


Ortholog ID: 4286
Species bra bra bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC103855879 LOC103850312 LOC106430228 LOC106383222 AT5G10630 LOC107902013 LOC107937919 LOC102609501 LOC100798594 LOC100801724 LOC100262342 LOC18100762 LOC7458736 LOC11406169 LOC101256564 LOC101264306 LOC102603749 LOC102586109 LOC107810086 LOC107830579 LOC4337409 LOC4326095 LOC103645758 LOC103642014 LOC123191047 LOC123190335 LOC123427772 LOC123428344 LOC8085873 LOC8071103 LOC100826934 LOC100840685 CHLRE_13g565750v5
Function* HBS1-like protein elongation factor 1-alpha 1 HBS1-like protein HBS1-like protein Translation elongation factor EF1A/initiation factor IF2gamma family protein HBS1-like protein HBS1-like protein uncharacterized LOC102609501 HBS1-like protein elongation factor 1-alpha uncharacterized LOC100262342 uncharacterized LOC18100762 uncharacterized LOC7458736 elongation factor 1-alpha uncharacterized LOC101256564 uncharacterized LOC101264306 HBS1-like protein HBS1-like protein uncharacterized LOC107810086 uncharacterized LOC107830579 uncharacterized LOC4337409 uncharacterized LOC4326095 HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein HBS1-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03015 mRNA surveillance pathway 2
gma00061 Fatty acid biosynthesis 2
gma00071 Fatty acid degradation 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03015 mRNA surveillance pathway 2
gma04148 Efferocytosis 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 5
sbi04120 Ubiquitin mediated proteolysis 2
sbi04382 Cornified envelope formation 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103855879 103850312 106430228 106383222 830928 107902013 107937919 102609501 100798594 100801724 100262342 18100762 7458736 11406169 101256564 101264306 102603749 102586109 107810086 107830579 4337409 4326095 103645758 103642014 123191047 123190335 123427772 123428344 8085873 8071103 100826934 100840685 5719048
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