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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856470   E3 ubiquitin-protein ligase RHA2B 
 ath-u.5   AT3G43430   RING/U-box superfamily protein 
 ath-u.5   AT5G20885   RING/U-box superfamily protein 
 gma-u.5   111138523   RING/U-box superfamily protein 
 gma-u.5   100306203   RING/U-box superfamily protein 
 ppo-u.5   7492274   RING-H2 finger protein ATL38 
 mtr-u.5   11423860   RING-H2 finger protein ATL64 

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Top 50 coexpressed genes to 103856470 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856470 (bra-r.6 coexpression data)

CoexMap"103856470"


braLOC103856470 | Entrez gene ID : 103856470    
Species bra ath gma ppo mtr bdi hvu vvi cit bna sbi sly ghi osa sot nta cre tae zma
Paralog 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (295 genes)  IEA  
Protein XP_033143944.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  extr 3,  nucl 1,  chlo_mito 1,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_033143944.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_033143944.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856470
ath-u.5
for
AT3G43430
ath-u.5
for
AT5G20885
gma-u.5
for
111138523
gma-u.5
for
100306203
ppo-u.5
for
7492274
mtr-u.5
for
11423860


Ortholog ID: 12202
Species bra bra bna bna ath ath ghi ghi cit gma gma ppo mtr
Symbol LOC103845635 LOC103856470 LOC106385155 LOC106425724 AT3G43430 AT5G20885 LOC107958810 LOC121204784 LOC102630436 LOC100306203 LOC111138523 LOC7492274 LOC11423860
Function* E3 ubiquitin-protein ligase RHA1B E3 ubiquitin-protein ligase RHA2B brassinosteroid-responsive RING protein 1 brassinosteroid-responsive RING protein 1-like RING/U-box superfamily protein RING/U-box superfamily protein brassinosteroid-responsive RING protein 1 probable E3 ubiquitin-protein ligase RHA1A brassinosteroid-responsive RING protein 1 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL38 RING-H2 finger protein ATL64
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00670 One carbon pool by folate 2
bra00999 Biosynthesis of various plant secondary metabolites 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00030 Pentose phosphate pathway 3
ath00480 Glutathione metabolism 3
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 4
mtr04016 MAPK signaling pathway - plant 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103845635 103856470 106385155 106425724 823423 832212 107958810 121204784 102630436 100306203 111138523 7492274 11423860
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