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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856938   pentatricopeptide repeat-containing protein At5g56310 
 ath-u.5   AT5G56310   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107926117   pentatricopeptide repeat-containing protein At5g56310 
 cit-r.1   102630594   pentatricopeptide repeat-containing protein At5g56310 
 gma-u.5   100808631   pentatricopeptide repeat-containing protein At5g56310 
 ppo-u.5   7463559   pentatricopeptide repeat-containing protein At5g56310 
 mtr-u.5   11421190   pentatricopeptide repeat-containing protein At5g56310 
 sly-u.5   101253313   pentatricopeptide repeat-containing protein At5g56310 
 sot-r.1   102603895   pentatricopeptide repeat-containing protein At5g56310-like 
 sot-r.1   102602128   pentatricopeptide repeat-containing protein At5g56310-like 
 nta-r.1   107793910   pentatricopeptide repeat-containing protein At5g56310 
 nta-r.1   107774246   pentatricopeptide repeat-containing protein At5g56310-like 
 zma-u.5   107275220   Pentatricopeptide repeat-containing protein 
 bdi-r.1   100843144   pentatricopeptide repeat-containing protein At5g56310 

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Top 50 coexpressed genes to 103856938 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856938 (bra-r.6 coexpression data)

CoexMap"103856938"


braLOC103856938 | Entrez gene ID : 103856938    
Species bra ath ghi cit gma ppo mtr sly sot nta zma bdi osa vvi tae sbi hvu cre bna
Paralog 1 1 1 1 1 1 1 1 2 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009132312.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_009132312.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_009132312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856938
ath-u.5
for
AT5G56310
ghi-r.1
for
107926117
cit-r.1
for
102630594
gma-u.5
for
100808631
ppo-u.5
for
7463559
mtr-u.5
for
11421190
sly-u.5
for
101253313
sot-r.1
for
102603895
sot-r.1
for
102602128
nta-r.1
for
107793910
nta-r.1
for
107774246
zma-u.5
for
107275220
bdi-r.1
for
100843144


Ortholog ID: 11002
Species bra ath ghi cit gma ppo mtr sly sot sot nta nta zma bdi
Symbol LOC103856938 AT5G56310 LOC107926117 LOC102630594 LOC100808631 LOC7463559 LOC11421190 LOC101253313 LOC102603895 LOC102602128 LOC107793910 LOC107774246 LOC107275220 LOC100843144
Function* pentatricopeptide repeat-containing protein At5g56310 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103856938 835730 107926117 102630594 100808631 7463559 11421190 101253313 102603895 102602128 107793910 107774246 107275220 100843144
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