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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G40040   60S acidic ribosomal protein family 
 ath-u.5   AT3G44590   60S acidic ribosomal protein family 
 ath-u.5   AT3G28500   60S acidic ribosomal protein family 
 gma-u.5   100817491   60S acidic ribosomal protein P2-4 
 gma-u.5   100306264   uncharacterized LOC100306264 
 gma-u.5   100499761   uncharacterized LOC100499761 
 vvi-u.5   100241998   large ribosomal subunit protein P2 
 vvi-u.5   100257998   large ribosomal subunit protein P2B 
 ppo-u.5   7474943   60S acidic ribosomal protein P2B 
 ppo-u.5   18097960   60S acidic ribosomal protein P2B 
 mtr-u.5   25483860   60S acidic ribosomal protein P2-4 
 mtr-u.5   25487532   60S acidic ribosomal protein P2-1 
 mtr-u.5   25480680   60S acidic ribosomal protein P2-2 
 sly-u.5   101249089   large ribosomal subunit protein P2 
 sly-u.5   101246850   large ribosomal subunit protein P2 
 osa-u.5   4329540   60S acidic ribosomal protein P2A 
 zma-u.5   542323   acidic ribosomal protein P2a 
 zma-u.5   542551   60S acidic ribosomal protein P2A-like 
 zma-u.5   100194313   acidic ribosomal protein P2a-4 

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Top 50 coexpressed genes to AT5G40040 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G40040 (ath-u.5 coexpression data)

CoexMap"103858307"


braLOC103858307 | Entrez gene ID : 103858307    
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 2 2 3 2 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03010 [list] [network] Ribosome (2036 genes)
GO BP
GO:0002182 [list] [network] cytoplasmic translational elongation  (7 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (240 genes)  IEA  
GO:0005840 [list] [network] ribosome  (658 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
Protein XP_009133885.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  extr 2  (predict for XP_009133885.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_009133885.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT5G40040
ath-u.5
for
AT3G44590
ath-u.5
for
AT3G28500
gma-u.5
for
100817491
gma-u.5
for
100306264
gma-u.5
for
100499761
vvi-u.5
for
100241998
vvi-u.5
for
100257998
ppo-u.5
for
7474943
ppo-u.5
for
18097960
mtr-u.5
for
25483860
mtr-u.5
for
25487532
mtr-u.5
for
25480680
sly-u.5
for
101249089
sly-u.5
for
101246850
osa-u.5
for
4329540
zma-u.5
for
542323
zma-u.5
for
542551
zma-u.5
for
100194313


Ortholog ID: 791
Species bra bna bna ath ath ghi ghi cit gma gma vvi vvi ppo mtr mtr sly sly nta nta osa zma zma tae hvu hvu sbi sbi bdi cre
Symbol LOC103854194 LOC106424327 LOC106395681 AT3G44590 AT2G27710 LOC107931932 LOC107931933 LOC102611784 LOC100499761 LOC100787024 LOC100241445 LOC100254522 LOC18097960 LOC25483860 LOC25487532 LOC101249089 LOC101253452 LOC107780915 LOC107815227 LOC4329540 LOC100194313 LOC542551 LOC123045396 LOC123426652 LOC123446135 LOC8075266 LOC8072508 LOC100838935 CHLRE_02g143050v5
Function* 60S acidic ribosomal protein P2-3-like 60S acidic ribosomal protein P2-2 60S acidic ribosomal protein P2-3-like 60S acidic ribosomal protein family 60S acidic ribosomal protein family 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2-4 uncharacterized LOC100499761 60S acidic ribosomal protein P2-2 60S acidic ribosomal protein P2B-like large ribosomal subunit protein P2 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2-4 60S acidic ribosomal protein P2-1 large ribosomal subunit protein P2 large ribosomal subunit protein P2y large ribosomal subunit protein P2-like large ribosomal subunit protein P2A 60S acidic ribosomal protein P2A acidic ribosomal protein P2a-4 60S acidic ribosomal protein P2A-like 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2B-like 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103854194 106424327 106395681 823584 817317 107931932 107931933 102611784 100499761 100787024 100241445 100254522 18097960 25483860 25487532 101249089 101253452 107780915 107815227 4329540 100194313 542551 123045396 123426652 123446135 8075266 8072508 100838935 5720458
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