ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103858698	protein SYM1
bra-r.6	103871177	uncharacterized LOC103871177
bna-r.1	106438733	protein SYM1
bna-r.1	BNAC06G05870D	uncharacterized BNAC06G05870D
bna-r.1	106436240	protein SYM1
ath-u.5	AT4G03410	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
ath-u.5	AT1G52870	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
ghi-r.1	107903543	uncharacterized LOC107903543
ghi-r.1	121212389	peroxisomal membrane protein 2
ghi-r.1	107952157	uncharacterized LOC107952157
cit-r.1	102611604	hypothetical protein
cit-r.1	102614505	uncharacterized LOC102614505
gma-u.5	100786706	uncharacterized LOC100786706
gma-u.5	100789384	protein SYM1
gma-u.5	100805057	uncharacterized LOC100805057
vvi-u.5	100253839	uncharacterized LOC100253839
vvi-u.5	100258564	uncharacterized LOC100258564
ppo-u.5	7460845	uncharacterized LOC7460845
ppo-u.5	18095627	protein SYM1
ppo-u.5	18108584	uncharacterized LOC18108584
mtr-u.5	25487391	uncharacterized LOC25487391
mtr-u.5	25487620	protein SYM1
sly-u.5	101259677	protein SYM1
sly-u.5	101247444	uncharacterized LOC101247444
sot-r.1	102590255	uncharacterized LOC102590255
sot-r.1	102595985	protein SYM1-like
nta-r.1	107789335	uncharacterized LOC107789335
nta-r.1	107808489	uncharacterized LOC107808489
nta-r.1	107805063	uncharacterized LOC107805063
osa-u.5	4346695	protein SYM1
osa-u.5	4333336	uncharacterized LOC4333336
zma-u.5	100216568	uncharacterized LOC100216568
zma-u.5	100285035	mpv17 / PMP22 family protein
tae-r.2	123042863	protein SYM1
tae-r.2	123055311	protein SYM1
tae-r.2	123180577	protein SYM1
hvu-r.1	123426040	protein SYM1-like
hvu-r.1	123449048	uncharacterized LOC123449048
sbi-r.1	8064554	uncharacterized LOC8064554
bdi-r.1	100846887	uncharacterized LOC100846887
cre-r.1	CHLRE_06g297900v5	uncharacterized protein

Top 50 coexpressed genes to 103858698 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103858698 (bra-r.6 coexpression data)

CoexMap"103858698"

[Cytoscape]

Annotation

functional annotation

KEGG

brp04146 [list] [network] Peroxisome (139 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane	(4714 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(7940 genes)	IEA

GO MF

Protein

XP_009134349.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, extr 1

(predict for XP_009134349.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_009134349.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103858698	bra-r.6 for 103871177	bna-r.1 for 106438733	bna-r.1 for BNAC06G05870D	bna-r.1 for 106436240	ath-u.5 for AT4G03410	ath-u.5 for AT1G52870	ghi-r.1 for 107903543	ghi-r.1 for 121212389	ghi-r.1 for 107952157	cit-r.1 for 102611604	cit-r.1 for 102614505	gma-u.5 for 100786706	gma-u.5 for 100789384	gma-u.5 for 100805057	vvi-u.5 for 100253839	vvi-u.5 for 100258564	ppo-u.5 for 7460845	ppo-u.5 for 18095627	ppo-u.5 for 18108584	mtr-u.5 for 25487391	mtr-u.5 for 25487620	sly-u.5 for 101259677	sly-u.5 for 101247444	sot-r.1 for 102590255	sot-r.1 for 102595985	nta-r.1 for 107789335	nta-r.1 for 107808489	nta-r.1 for 107805063	osa-u.5 for 4346695	osa-u.5 for 4333336	zma-u.5 for 100216568	zma-u.5 for 100285035	tae-r.2 for 123042863	tae-r.2 for 123055311	tae-r.2 for 123180577	hvu-r.1 for 123426040	hvu-r.1 for 123449048	sbi-r.1 for 8064554	bdi-r.1 for 100846887	cre-r.1 for CHLRE_06g297900v5

Ortholog

Ortholog ID: 3602

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein SYM1

uncharacterized LOC103871177

protein SYM1

uncharacterized BNAC06G05870D

uncharacterized LOC125588745

Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

uncharacterized LOC107903543

uncharacterized LOC107952157

peroxisomal membrane protein 2

hypothetical protein

uncharacterized LOC102614505

uncharacterized LOC100786706

protein SYM1

uncharacterized LOC106798699

uncharacterized LOC100253839

uncharacterized LOC100258564

uncharacterized LOC7460845

protein SYM1

uncharacterized LOC18108584

uncharacterized LOC25487391

protein SYM1

uncharacterized LOC101247444

uncharacterized LOC102590255

protein SYM1-like

uncharacterized LOC107789335

uncharacterized LOC107805063

uncharacterized LOC107799776

protein SYM1

uncharacterized LOC4333336

uncharacterized LOC100216568

mpv17 / PMP22 family protein

protein SYM1

protein SYM1-like

uncharacterized LOC123449048

uncharacterized LOC8064554

uncharacterized LOC100846887

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	4
cit00195	Photosynthesis	3
cit00051	Fructose and mannose metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04146	Peroxisome	2
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	4
ppo00380	Tryptophan metabolism	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo01200	Carbon metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	5
sly04141	Protein processing in endoplasmic reticulum	4
sly00290	Valine, leucine and isoleucine biosynthesis	3
sly01210	2-Oxocarboxylic acid metabolism	3
sly00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	3
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	5
tae04146	Peroxisome	3
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	3
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

103858698

103871177

106438733

106405987

125588745

827932

841720

107903543

107952157

107925395

102611604

102614505

100786706

100789384

106798699

100253839

100258564

7460845

18095627

18108584

25487391

25487620

101259677

101247444

102590255

102595985

107789335

107805063

107799776

4346695

4333336

100216568

100285035

123042863

123180577

123191135

123426040

123449048

8064554

100846887

5717028

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	2	3	2	3	2	3	2	2	2	3	2	2	3	2	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103858698 (bra-r.6 coexpression data)

Top 50 enrichment test to 103858698 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**