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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103866825   RNA binding motif protein, X-linked-like-1 
 bna-r.1   106395828   nucleolin-like 
 bna-r.1   106450774   RNA-binding motif protein, X chromosome 
 ath-u.5   AT2G44710   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ghi-r.1   107911856   nucleolin 
 ghi-r.1   107923379   nucleolin 
 ghi-r.1   107911855   nucleolin 
 cit-r.1   RRMP1   RNA recognition motif protein 1 
 gma-u.5   100777658   nucleolin 
 gma-u.5   100779340   nucleolin 
 gma-u.5   100808583   nucleolin 
 vvi-u.5   100266805   uncharacterized LOC100266805 
 vvi-u.5   100232913   heterogeneous nuclear ribonucleoprotein Q 
 ppo-u.5   7483804   uncharacterized LOC7483804 
 ppo-u.5   18105096   uncharacterized LOC18105096 
 mtr-u.5   25500115   RNA-binding motif protein, Y chromosome, family 1 member B 
 mtr-u.5   11433736   nucleolin 
 sly-u.5   101251325   uncharacterized LOC101251325 
 sly-u.5   101258799   heterogeneous nuclear ribonucleoprotein Q 
 sly-u.5   101259595   heterogeneous nuclear ribonucleoprotein Q-like 
 sot-r.1   102581134   nucleolin-like 
 sot-r.1   102593822   heterogeneous nuclear ribonucleoprotein R-like 
 sot-r.1   102580113   nucleolin-like 
 nta-r.1   107831253   uncharacterized LOC107831253 
 nta-r.1   107804749   uncharacterized LOC107804749 
 nta-r.1   107802337   uncharacterized LOC107802337 
 osa-u.5   4336550   uncharacterized LOC4336550 
 zma-u.5   541976   RNA recognition water-stress protein 1 
 zma-u.5   109943278   heterogeneous nuclear ribonucleoprotein Q 
 zma-u.5   100216781   uncharacterized LOC100216781 
 tae-r.2   123189952   nucleolin 
 tae-r.2   123054073   nucleolin 
 tae-r.2   123046192   nucleolin 
 hvu-r.1   123427396   nucleolin 
 sbi-r.1   110436555   nucleolin 
 bdi-r.1   100827844   uncharacterized LOC100827844 

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Top 50 coexpressed genes to 103866825 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103866825 (bra-r.6 coexpression data)

CoexMap"103866825"


braLOC103866825 | Entrez gene ID : 103866825    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 3 1 3 2 2 2 3 3 3 1 3 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_033148294.1 [sequence] [blastp]
XP_033148295.1 [sequence] [blastp]
XP_033148296.1 [sequence] [blastp]
XP_033148297.1 [sequence] [blastp]
XP_033148298.1 [sequence] [blastp]
XP_033148299.1 [sequence] [blastp]
XP_033148300.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148294.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148295.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148296.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148297.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148298.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_033148299.1)
nucl 5,  mito 4,  chlo 1,  plas 1  (predict for XP_033148300.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_033148294.1)
mito 6  (predict for XP_033148295.1)
mito 6  (predict for XP_033148296.1)
mito 6  (predict for XP_033148297.1)
mito 6  (predict for XP_033148298.1)
mito 6  (predict for XP_033148299.1)
other 5,  mito 4  (predict for XP_033148300.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103866825
bna-r.1
for
106395828
bna-r.1
for
106450774
ath-u.5
for
AT2G44710
ghi-r.1
for
107911856
ghi-r.1
for
107923379
ghi-r.1
for
107911855
cit-r.1
for
RRMP1
gma-u.5
for
100777658
gma-u.5
for
100779340
gma-u.5
for
100808583
vvi-u.5
for
100266805
vvi-u.5
for
100232913
ppo-u.5
for
7483804
ppo-u.5
for
18105096
mtr-u.5
for
25500115
mtr-u.5
for
11433736
sly-u.5
for
101251325
sly-u.5
for
101258799
sly-u.5
for
101259595
sot-r.1
for
102581134
sot-r.1
for
102593822
sot-r.1
for
102580113
nta-r.1
for
107831253
nta-r.1
for
107804749
nta-r.1
for
107802337
osa-u.5
for
4336550
zma-u.5
for
541976
zma-u.5
for
109943278
zma-u.5
for
100216781
tae-r.2
for
123189952
tae-r.2
for
123054073
tae-r.2
for
123046192
hvu-r.1
for
123427396
sbi-r.1
for
110436555
bdi-r.1
for
100827844


Ortholog ID: 5092
Species bra bna bna ath ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi
Symbol LOC103866825 LOC106395828 LOC106450774 AT2G44710 LOC107911856 LOC107911855 LOC107923377 RRMP1 LOC100779340 LOC100808583 LOC100811387 LOC100266805 LOC100232913 LOC7483804 LOC18105096 LOC25500115 LOC11433736 LOC101251325 LOC101258799 LOC101259595 LOC102581134 LOC102593822 LOC102580113 LOC107831253 LOC107804749 LOC107770526 LOC4336550 LOC541976 LOC109943278 LOC100216781 LOC123189952 LOC123054073 LOC123046192 LOC123427396 LOC110436555 LOC100827844
Function* RNA binding motif protein, X-linked-like-1 nucleolin-like RNA-binding motif protein, X chromosome RNA-binding (RRM/RBD/RNP motifs) family protein nucleolin nucleolin nucleolin RNA recognition motif protein 1 nucleolin nucleolin nucleolin uncharacterized LOC100266805 heterogeneous nuclear ribonucleoprotein Q uncharacterized LOC7483804 uncharacterized LOC18105096 RNA-binding motif protein, Y chromosome, family 1 member B nucleolin uncharacterized LOC101251325 heterogeneous nuclear ribonucleoprotein Q heterogeneous nuclear ribonucleoprotein Q-like nucleolin-like heterogeneous nuclear ribonucleoprotein R-like nucleolin-like uncharacterized LOC107831253 uncharacterized LOC107804749 uncharacterized LOC107770526 uncharacterized LOC4336550 RNA recognition water-stress protein 1 heterogeneous nuclear ribonucleoprotein Q uncharacterized LOC100216781 nucleolin nucleolin nucleolin nucleolin nucleolin uncharacterized LOC100827844
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103866825 106395828 106450774 819079 107911856 107911855 107923377 102578014 100779340 100808583 100811387 100266805 100232913 7483804 18105096 25500115 11433736 101251325 101258799 101259595 102581134 102593822 102580113 107831253 107804749 107770526 4336550 541976 109943278 100216781 123189952 123054073 123046192 123427396 110436555 100827844
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