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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103869547   DEAD-box ATP-dependent RNA helicase 51 
 ath-u.5   AT3G18600   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT5G65900   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100798290   DEAD-box ATP-dependent RNA helicase 27 
 gma-u.5   100797375   DEAD-box ATP-dependent RNA helicase 27 
 gma-u.5   100793807   DEAD-box ATP-dependent RNA helicase 27 
 vvi-u.5   100242258   DEAD-box ATP-dependent RNA helicase 27 
 ppo-u.5   18102018   DEAD-box ATP-dependent RNA helicase 51-like 
 ppo-u.5   7468000   DEAD-box ATP-dependent RNA helicase 51 
 mtr-u.5   25486792   DEAD-box ATP-dependent RNA helicase 27 
 mtr-u.5   11441584   DEAD-box ATP-dependent RNA helicase 27 
 mtr-u.5   11438740   DEAD-box ATP-dependent RNA helicase 51 
 sly-u.5   101245343   DEAD-box ATP-dependent RNA helicase 51 
 osa-u.5   4334469   DEAD-box ATP-dependent RNA helicase 27-like 
 zma-u.5   100501728   DEAD-box ATP-dependent RNA helicase 51 
 zma-u.5   103640803   DEAD-box ATP-dependent RNA helicase 27 

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Top 50 coexpressed genes to 103869547 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103869547 (bra-r.6 coexpression data)

CoexMap"103869547"


braLOC103869547 | Entrez gene ID : 103869547    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 2 3 1 2 3 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (35 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (300 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (92 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (5846 genes)  IEA  
Protein XP_009145878.1 [sequence] [blastp]
XP_033148802.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_009145878.1)
cyto 4,  nucl 4,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_033148802.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009145878.1)
other 8  (predict for XP_033148802.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103869547
ath-u.5
for
AT3G18600
ath-u.5
for
AT5G65900
gma-u.5
for
100798290
gma-u.5
for
100797375
gma-u.5
for
100793807
vvi-u.5
for
100242258
ppo-u.5
for
18102018
ppo-u.5
for
7468000
mtr-u.5
for
25486792
mtr-u.5
for
11441584
mtr-u.5
for
11438740
sly-u.5
for
101245343
osa-u.5
for
4334469
zma-u.5
for
100501728
zma-u.5
for
103640803


Ortholog ID: 3222
Species bra bra bna bna ath ath ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma hvu sbi bdi cre
Symbol LOC103837961 LOC103859759 LOC106412129 LOC106439550 AT5G65900 AT3G18600 LOC107926589 LOC107949736 LOC102619669 LOC100798290 LOC100798885 LOC100242258 LOC18102018 LOC7468000 LOC11438740 LOC11441584 LOC101245343 LOC102597715 LOC107794494 LOC107806417 LOC4334469 LOC100501728 LOC123399846 LOC8061145 LOC104584763 CHLRE_07g314900v5
Function* DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEA(D/H)-box RNA helicase family protein P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51-like DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51-like DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27-like DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103837961 103859759 106412129 106439550 836719 821391 107926589 107949736 102619669 100798290 100798885 100242258 18102018 7468000 11438740 11441584 101245343 102597715 107794494 107806417 4334469 100501728 123399846 8061145 104584763 5726525
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