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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103871973   transcription factor SCREAM2 
 bra-r.6   103854299   transcription factor ICE1 
 bra-r.6   103875273   transcription factor ICE1 
 bra-r.6   103846282   transcription factor ICE1 
 bna-r.1   106415071   transcription factor ICE1-like 
 bna-r.1   106410988   transcription factor ICE1 
 bna-r.1   106347723   transcription factor ICE1 
 ath-u.5   ICE1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   SCRM2   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107911744   transcription factor ICE1 
 ghi-r.1   107949636   transcription factor ICE1 
 ghi-r.1   107935854   transcription factor ICE1 
 cit-r.1   102630264   transcription factor ICE1-like 
 cit-r.1   102620321   transcription factor ICE1 
 gma-u.5   ICE4   inducer of CBF expression 4 
 gma-u.5   ICEE   transcription factor ICE1-like 
 gma-u.5   ICE2   inducer of CBF expression 2 
 vvi-u.5   100245749   transcription factor ICE1 
 vvi-u.5   100265294   transcription factor ICE1 
 vvi-u.5   100245461   transcription factor ICE1 
 ppo-u.5   7454596   transcription factor ICE1 
 ppo-u.5   7457576   transcription factor ICE1 
 mtr-u.5   11440995   transcription factor SCREAM2 
 mtr-u.5   25491140   transcription factor ICE1 
 sly-u.5   101266110   transcription factor ICE1 
 sly-u.5   ICE1a   transcription factor ICE1-like 
 sot-r.1   102589311   transcription factor ICE1-like 
 sot-r.1   102582692   transcription factor ICE1-like 
 nta-r.1   107831628   transcription factor ICE1-like 
 nta-r.1   107820223   transcription factor ICE1-like 
 nta-r.1   107798349   transcription factor ICE1 
 osa-u.5   4326959   transcription factor ICE1 
 osa-u.5   4350609   transcription factor ICE1 
 zma-u.5   103652960   transcription factor SCREAM2 
 zma-u.5   100193144   uncharacterized LOC100193144 
 zma-u.5   103648024   transcription factor SCREAM2 
 tae-r.2   100146096   transcription factor ICE1 
 tae-r.2   123168446   transcription factor ICE1 
 tae-r.2   123162127   transcription factor ICE1 
 hvu-r.1   123445315   transcription factor ICE1-like 
 hvu-r.1   123411444   transcription factor ICE1-like 
 sbi-r.1   8082581   transcription factor ICE1 
 sbi-r.1   8064787   transcription factor SCREAM2 
 sbi-r.1   8059393   transcription factor ICE1 
 bdi-r.1   100827768   transcription factor ICE1 
 bdi-r.1   100826163   transcription factor SCREAM2 

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Top 50 coexpressed genes to 103871973 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103871973 (bra-r.6 coexpression data)

CoexMap"103871973"


braLOC103871973 | Entrez gene ID : 103871973    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 3 2 2 2 2 3 2 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1199 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1840 genes)  IEA  
Protein XP_009148559.1 [sequence] [blastp]
XP_018514964.1 [sequence] [blastp]
XP_033148891.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009148559.1)
nucl 9  (predict for XP_018514964.1)
nucl 9  (predict for XP_033148891.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009148559.1)
other 9  (predict for XP_018514964.1)
other 9  (predict for XP_033148891.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103871973
bra-r.6
for
103854299
bra-r.6
for
103875273
bra-r.6
for
103846282
bna-r.1
for
106415071
bna-r.1
for
106410988
bna-r.1
for
106347723
ath-u.5
for
ICE1
ath-u.5
for
SCRM2
ghi-r.1
for
107911744
ghi-r.1
for
107949636
ghi-r.1
for
107935854
cit-r.1
for
102630264
cit-r.1
for
102620321
gma-u.5
for
ICE4
gma-u.5
for
ICEE
gma-u.5
for
ICE2
vvi-u.5
for
100245749
vvi-u.5
for
100265294
vvi-u.5
for
100245461
ppo-u.5
for
7454596
ppo-u.5
for
7457576
mtr-u.5
for
11440995
mtr-u.5
for
25491140
sly-u.5
for
101266110
sly-u.5
for
ICE1a
sot-r.1
for
102589311
sot-r.1
for
102582692
nta-r.1
for
107831628
nta-r.1
for
107820223
nta-r.1
for
107798349
osa-u.5
for
4326959
osa-u.5
for
4350609
zma-u.5
for
103652960
zma-u.5
for
100193144
zma-u.5
for
103648024
tae-r.2
for
100146096
tae-r.2
for
123168446
tae-r.2
for
123162127
hvu-r.1
for
123445315
hvu-r.1
for
123411444
sbi-r.1
for
8082581
sbi-r.1
for
8064787
sbi-r.1
for
8059393
bdi-r.1
for
100827768
bdi-r.1
for
100826163


Ortholog ID: 1865
Species bra bra bra bna bna bna ath ath ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC103854299 LOC103875273 LOC103846282 LOC106360369 LOC106362055 LOC106382368 ICE1 SCRM2 LOC107911744 LOC107949636 LOC107935854 LOC102630264 LOC102620321 ICEE ICE1 LOC100804797 LOC100245749 LOC100265294 LOC100245461 LOC7454596 LOC7457576 LOC11440995 LOC25491140 LOC101266110 ICE1a LOC102589311 LOC102582692 LOC107831628 LOC107798349 LOC107788689 LOC4326959 LOC4350609 LOC103652960 LOC100193144 LOC103648024 LOC123162127 LOC123445315 LOC123411444 LOC8082581 LOC8064787 LOC8059393 LOC100827768 LOC100826163
Function* transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1-like transcription factor SCREAM2-like transcription factor SCREAM2-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1-like transcription factor ICE1 transcription factor ICE1-like inducer of CBF expression 1 transcription factor ICE1-like transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor SCREAM2 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1-like transcription factor ICE1-like transcription factor ICE1-like transcription factor ICE1-like transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor ICE1 transcription factor SCREAM2 uncharacterized LOC100193144 transcription factor SCREAM2 transcription factor ICE1 transcription factor ICE1-like transcription factor ICE1-like transcription factor ICE1 transcription factor SCREAM2 transcription factor ICE1 transcription factor ICE1 transcription factor SCREAM2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00052 Galactose metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04075 Plant hormone signal transduction 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00910 Nitrogen metabolism 4
nta01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 3
bdi00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103854299 103875273 103846282 106360369 106362055 106382368 822287 837843 107911744 107949636 107935854 102630264 102620321 100805320 100217332 100804797 100245749 100265294 100245461 7454596 7457576 11440995 25491140 101266110 101248492 102589311 102582692 107831628 107798349 107788689 4326959 4350609 103652960 100193144 103648024 123162127 123445315 123411444 8082581 8064787 8059393 100827768 100826163
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