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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APC8   anaphase-promoting complex subunit 8 
 gma-u.5   ILPA1   anaphase-promoting complex subunit 8-like protein 
 gma-u.5   100789971   anaphase-promoting complex subunit 8 
 gma-u.5   100783872   anaphase-promoting complex subunit 8 
 vvi-u.5   100247356   anaphase-promoting complex subunit 8 
 vvi-u.5   100249407   anaphase-promoting complex subunit 8 
 ppo-u.5   7483468   anaphase-promoting complex subunit 8 
 mtr-u.5   25485211   anaphase-promoting complex subunit 8 
 mtr-u.5   11428624   anaphase-promoting complex subunit 8 
 sly-u.5   101260121   anaphase-promoting complex subunit 8 
 osa-u.5   4330199   anaphase-promoting complex subunit 8 
 zma-u.5   100280734   cell division cycle protein 23 

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Top 50 coexpressed genes to APC8 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APC8 (ath-u.5 coexpression data)

CoexMap"103873172"


braLOC103873172 | Entrez gene ID : 103873172    
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 3 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04120 [list] [network] Ubiquitin mediated proteolysis (225 genes)
GO BP
GO:0051301 [list] [network] cell division  (75 genes)  IEA  
GO CC
GO:0005680 [list] [network] anaphase-promoting complex  (24 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009149844.1 [sequence] [blastp]
XP_033129893.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  plas 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_009149844.1)
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_033129893.1)
Subcellular
localization
TargetP
other 3  (predict for XP_009149844.1)
other 7,  chlo 4  (predict for XP_033129893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
APC8
gma-u.5
for
ILPA1
gma-u.5
for
100789971
gma-u.5
for
100783872
vvi-u.5
for
100247356
vvi-u.5
for
100249407
ppo-u.5
for
7483468
mtr-u.5
for
25485211
mtr-u.5
for
11428624
sly-u.5
for
101260121
osa-u.5
for
4330199
zma-u.5
for
100280734


Ortholog ID: 6579
Species bra bna bna ath ghi ghi cit cit gma gma vvi vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC103874170 LOC125596249 LOC106419806 APC8 LOC107938199 LOC107897813 LOC102616882 LOC102614407 LOC100783872 ILPA1 LOC100247356 LOC100249407 LOC7483468 LOC11428624 LOC25485211 LOC101260121 LOC102605610 LOC107800882 LOC107793406 LOC4330199 LOC100280734 LOC123145048 LOC123127951 LOC123401917 LOC8073960 LOC100846817 CHLRE_16g681578v5
Function* anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8-like anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8-like anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8-like protein anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8-like anaphase-promoting complex subunit 8 cell division cycle protein 23 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit 8 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04120 Ubiquitin mediated proteolysis 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03082 ATP-dependent chromatin remodeling 2
gma00240 Pyrimidine metabolism 2
gma00670 One carbon pool by folate 2
gma00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 5
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 5
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103874170 125596249 106419806 823970 107938199 107897813 102616882 102614407 100783872 100811816 100247356 100249407 7483468 11428624 25485211 101260121 102605610 107800882 107793406 4330199 100280734 123145048 123127951 123401917 8073960 100846817 5724430
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