Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346498   E3 ubiquitin-protein ligase RSL1 
 bna-r.1   106347508   E3 ubiquitin-protein ligase RSL1-like 
 ghi-r.1   107954248   uncharacterized LOC107954248 
 ghi-r.1   107953205   uncharacterized LOC107953205 
 cit-r.1   102623002   E3 ubiquitin-protein ligase RSL1 
 gma-u.5   100790037   uncharacterized LOC100790037 
 gma-u.5   RTRP2   probable E3 ubiquitin-protein ligase rbrA-like protein 
 vvi-u.5   100241711   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   7487342   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   7478614   E3 ubiquitin-protein ligase RSL1 
 mtr-u.5   112420731   uncharacterized LOC112420731 
 sly-u.5   101251588   E3 ubiquitin-protein ligase RSL1-like 
 sot-r.1   102602343   probable E3 ubiquitin-protein ligase ARI9 
 sot-r.1   102603567   uncharacterized LOC102603567 
 sot-r.1   102601685   uncharacterized LOC102601685 
 nta-r.1   107778247   E3 ubiquitin-protein ligase RSL1-like 
 nta-r.1   107767565   E3 ubiquitin-protein ligase RSL1 
 nta-r.1   107761951   E3 ubiquitin-protein ligase RSL1-like 
 zma-u.5   100191809   putative RING zinc finger domain superfamily protein 
 tae-r.2   123103236   uncharacterized LOC123103236 
 tae-r.2   123103239   uncharacterized LOC123103239 
 tae-r.2   123111427   uncharacterized LOC123111427 
 hvu-r.1   123452998   E3 ubiquitin-protein ligase ARIH2-like 
 hvu-r.1   123410985   E3 ubiquitin-protein ligase arih1-like 
 hvu-r.1   123399745   uncharacterized LOC123399745 
 sbi-r.1   8067567   uncharacterized LOC8067567 
 bdi-r.1   100830199   uncharacterized LOC100830199 
 bdi-r.1   100828328   uncharacterized LOC100828328 

close


Top 50 coexpressed genes to 106346498 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106346498 (bna-r.1 coexpression data)

CoexMap"106346498"


bnaLOC106346498 | Entrez gene ID : 106346498    
Species bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi bra osa cre ath
Paralog 2 2 1 2 1 2 1 1 3 3 1 3 3 1 2 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (127 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (267 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (468 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (113 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (863 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
Protein XP_013641304.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_013641304.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013641304.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346498
bna-r.1
for
106347508
ghi-r.1
for
107954248
ghi-r.1
for
107953205
cit-r.1
for
102623002
gma-u.5
for
100790037
gma-u.5
for
RTRP2
vvi-u.5
for
100241711
ppo-u.5
for
7487342
ppo-u.5
for
7478614
mtr-u.5
for
112420731
sly-u.5
for
101251588
sot-r.1
for
102602343
sot-r.1
for
102603567
sot-r.1
for
102601685
nta-r.1
for
107778247
nta-r.1
for
107767565
nta-r.1
for
107761951
zma-u.5
for
100191809
tae-r.2
for
123103236
tae-r.2
for
123103239
tae-r.2
for
123111427
hvu-r.1
for
123452998
hvu-r.1
for
123410985
hvu-r.1
for
123399745
sbi-r.1
for
8067567
bdi-r.1
for
100830199
bdi-r.1
for
100828328


Ortholog ID: 4572
Species bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot sot sot nta nta nta zma tae tae tae hvu hvu hvu sbi bdi bdi
Symbol LOC106346498 LOC106347508 LOC107954248 LOC107953205 LOC102623002 LOC100790037 RTRP2 LOC100241711 LOC7487342 LOC7478614 LOC112420731 LOC101251588 LOC102602343 LOC102603567 LOC102601685 LOC107767565 LOC107761951 LOC107761949 LOC100191809 LOC123103236 LOC123111427 LOC123111430 LOC123452998 LOC123410985 LOC123399745 LOC8067567 LOC100830199 LOC100828328
Function* E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like uncharacterized LOC107954248 uncharacterized LOC107953205 E3 ubiquitin-protein ligase RSL1 uncharacterized LOC100790037 probable E3 ubiquitin-protein ligase rbrA-like protein E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 uncharacterized LOC112420731 E3 ubiquitin-protein ligase RSL1-like probable E3 ubiquitin-protein ligase ARI9 uncharacterized LOC102603567 uncharacterized LOC102601685 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1-like putative RING zinc finger domain superfamily protein uncharacterized LOC123103236 uncharacterized LOC123111427 uncharacterized LOC123111430 E3 ubiquitin-protein ligase ARIH2-like E3 ubiquitin-protein ligase arih1-like uncharacterized LOC123399745 uncharacterized LOC8067567 uncharacterized LOC100830199 uncharacterized LOC100828328
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi04626 Plant-pathogen interaction 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma04626 Plant-pathogen interaction 3
gma04016 MAPK signaling pathway - plant 2
gma04070 Phosphatidylinositol signaling system 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346498 106347508 107954248 107953205 102623002 100790037 100786163 100241711 7487342 7478614 112420731 101251588 102602343 102603567 102601685 107767565 107761951 107761949 100191809 123103236 123111427 123111430 123452998 123410985 123399745 8067567 100830199 100828328
The preparation time of this page was 1.5 [sec].