ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106347413	chloroplastic import inner membrane translocase subunit HP30-1
bna-r.1	125591792	chloroplastic import inner membrane translocase subunit HP30-2-like
bna-r.1	106418647	chloroplastic import inner membrane translocase subunit HP30-1
bna-r.1	106348487	chloroplastic import inner membrane translocase subunit HP30-2-like
bra-r.6	103873049	chloroplastic import inner membrane translocase subunit HP30-1
bra-r.6	103874331	chloroplastic import inner membrane translocase subunit HP30-2
ath-u.5	AT3G49560	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
ath-u.5	AT5G24650	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
ghi-r.1	107937272	chloroplastic import inner membrane translocase subunit HP30-2
ghi-r.1	107924615	chloroplastic import inner membrane translocase subunit HP30-2
ghi-r.1	107904542	chloroplastic import inner membrane translocase subunit HP30-2
cit-r.1	102629263	hypothetical protein
gma-u.5	100813121	chloroplastic import inner membrane translocase subunit HP30-2
gma-u.5	100775460	chloroplastic import inner membrane translocase subunit HP30-2
vvi-u.5	100267522	chloroplastic import inner membrane translocase subunit HP30-2
ppo-u.5	7464460	chloroplastic import inner membrane translocase subunit HP30-2
ppo-u.5	7493475	chloroplastic import inner membrane translocase subunit HP30-2
mtr-u.5	11421679	chloroplastic import inner membrane translocase subunit HP30-2
sly-u.5	101257149	chloroplastic import inner membrane translocase subunit HP30-2-like
sot-r.1	102597734	uncharacterized LOC102597734
nta-r.1	107761618	chloroplastic import inner membrane translocase subunit HP30-2
nta-r.1	107768935	chloroplastic import inner membrane translocase subunit HP30-2
osa-u.5	9267259	chloroplastic import inner membrane translocase subunit HP30-2
osa-u.5	4335748	chloroplastic import inner membrane translocase subunit HP30-2
zma-u.5	100284326	uncharacterized LOC100284326
zma-u.5	100193860	uncharacterized LOC100193860
zma-u.5	100280473	SAM domain family protein
tae-r.2	123045370	chloroplastic import inner membrane translocase subunit HP30-2
tae-r.2	123073794	chloroplastic import inner membrane translocase subunit HP30-2
tae-r.2	123189123	chloroplastic import inner membrane translocase subunit HP30-2
hvu-r.1	123426622	chloroplastic import inner membrane translocase subunit HP30-2-like
hvu-r.1	123442535	chloroplastic import inner membrane translocase subunit HP30-2-like
sbi-r.1	8056819	uncharacterized LOC8056819
sbi-r.1	8072071	uncharacterized LOC8072071
bdi-r.1	100827945	uncharacterized LOC100827945
bdi-r.1	100840753	uncharacterized LOC100840753
cre-r.1	CHLRE_03g183100v5	uncharacterized protein

Top 50 coexpressed genes to 106347413 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106347413 (bna-r.1 coexpression data)

CoexMap"106347413"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045036 [list] [network] protein targeting to chloroplast	(51 genes)	IEA
GO:0045039 [list] [network] protein insertion into mitochondrial inner membrane	(62 genes)	IEA

GO CC

GO:0042721 [list] [network] TIM22 mitochondrial import inner membrane insertion complex	(36 genes)	IEA
GO:0009706 [list] [network] chloroplast inner membrane	(48 genes)	IEA

GO MF

GO:0008320 [list] [network] protein transmembrane transporter activity	(117 genes)	IEA
GO:0005515 [list] [network] protein binding	(12789 genes)	IEA

Protein

XP_013642394.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 2, chlo 1, cysk 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_013642394.1)

Subcellular
localization
TargetP

other 8

(predict for XP_013642394.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106347413	bna-r.1 for 125591792	bna-r.1 for 106418647	bna-r.1 for 106348487	bra-r.6 for 103873049	bra-r.6 for 103874331	ath-u.5 for AT3G49560	ath-u.5 for AT5G24650	ghi-r.1 for 107937272	ghi-r.1 for 107924615	ghi-r.1 for 107904542	cit-r.1 for 102629263	gma-u.5 for 100813121	gma-u.5 for 100775460	vvi-u.5 for 100267522	ppo-u.5 for 7464460	ppo-u.5 for 7493475	mtr-u.5 for 11421679	sly-u.5 for 101257149	sot-r.1 for 102597734	nta-r.1 for 107761618	nta-r.1 for 107768935	osa-u.5 for 9267259	osa-u.5 for 4335748	zma-u.5 for 100284326	zma-u.5 for 100193860	zma-u.5 for 100280473	tae-r.2 for 123045370	tae-r.2 for 123073794	tae-r.2 for 123189123	hvu-r.1 for 123426622	hvu-r.1 for 123442535	sbi-r.1 for 8056819	sbi-r.1 for 8072071	bdi-r.1 for 100827945	bdi-r.1 for 100840753	cre-r.1 for CHLRE_03g183100v5

Ortholog

Ortholog ID: 4404

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

chloroplastic import inner membrane translocase subunit HP30-1

chloroplastic import inner membrane translocase subunit HP30-2-like