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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106348139   DNA mismatch repair protein MLH3 
 gma-u.5   100788019   DNA mismatch repair protein MLH3 
 gma-u.5   100780255   DNA mismatch repair protein MLH3 
 vvi-u.5   100253902   DNA mismatch repair protein MLH3 
 ppo-u.5   7492129   DNA mismatch repair protein MLH3 
 mtr-u.5   11424785   DNA mismatch repair protein MLH3 
 sly-u.5   101258812   DNA mismatch repair protein MLH3 
 osa-u.5   4347791   DNA mismatch repair protein MLH3 
 zma-u.5   103647640   DNA mismatch repair protein MLH3 
 zma-u.5   109944383   uncharacterized LOC109944383 

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Top 50 coexpressed genes to 106348139 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106348139 (bna-r.1 coexpression data)

CoexMap"106348139"


bnaLOC106348139 | Entrez gene ID : 106348139    
Species bna gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi ath nta tae cre sot
Paralog 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03430 [list] [network] Mismatch repair (77 genes)
GO BP
GO:0006298 [list] [network] mismatch repair  (42 genes)  IEA  
GO CC
GO:0032300 [list] [network] mismatch repair complex  (12 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (31 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (59 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (1360 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013643260.2 [sequence] [blastp]
XP_013643261.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 1,  mito 1,  cysk 1  (predict for XP_013643260.2)
nucl 5,  cyto 1,  mito 1,  cysk 1  (predict for XP_013643261.2)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_013643260.2)
other 5,  mito 5  (predict for XP_013643261.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106348139
gma-u.5
for
100788019
gma-u.5
for
100780255
vvi-u.5
for
100253902
ppo-u.5
for
7492129
mtr-u.5
for
11424785
sly-u.5
for
101258812
osa-u.5
for
4347791
zma-u.5
for
103647640
zma-u.5
for
109944383


Ortholog ID: 7309
Species bna bna bra ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC111214361 LOC106348139 LOC103862416 LOC107939586 LOC107937809 LOC102608669 LOC100788019 LOC100780255 LOC100253902 LOC7492129 LOC11424785 LOC101258812 LOC102582017 LOC102587970 LOC107779080 LOC107814329 LOC4347791 LOC109944383 LOC109944384 LOC123113022 LOC123122538 LOC123451897 LOC8077226 LOC100827102 CHLRE_07g336650v5
Function* DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3-like uncharacterized LOC102587970 DNA mismatch repair protein MLH3-like DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 uncharacterized LOC109944383 uncharacterized LOC109944384 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03460 Fanconi anemia pathway 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03460 Fanconi anemia pathway 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03430 Mismatch repair 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111214361 106348139 103862416 107939586 107937809 102608669 100788019 100780255 100253902 7492129 11424785 101258812 102582017 102587970 107779080 107814329 4347791 109944383 109944384 123113022 123122538 123451897 8077226 100827102 5725625
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