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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106349960   partner of Y14 and mago-like 
 ath-u.5   PYM   partner of Y14-MAGO 
 gma-u.5   100820219   partner of Y14 and mago 
 gma-u.5   100791525   partner of Y14 and mago 
 vvi-u.5   100249740   partner of Y14 and mago 
 ppo-u.5   18096628   partner of Y14 and mago 
 ppo-u.5   18094902   partner of Y14 and mago 
 mtr-u.5   11423581   partner of Y14 and mago 
 sly-u.5   101261756   partner of Y14 and mago 
 osa-u.5   4332324   partner of Y14 and mago 
 zma-u.5   100273358   partner of Y14-MAGO 
 zma-u.5   100283795   PYM protein 

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Top 50 coexpressed genes to 106349960 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106349960 (bna-r.1 coexpression data)

CoexMap"106349960"


bnaLOC106349960 | Entrez gene ID : 106349960    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO:1903259 [list] [network] exon-exon junction complex disassembly  (5 genes)  IEA  
GO CC
GO:0035145 [list] [network] exon-exon junction complex  (23 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013645374.1 [sequence] [blastp]
XP_022576361.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  mito 1,  plas 1,  chlo_mito 1  (predict for XP_013645374.1)
nucl 6,  nucl_plas 4,  mito 1,  plas 1,  chlo_mito 1  (predict for XP_022576361.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_013645374.1)
other 7,  chlo 3  (predict for XP_022576361.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106349960

.
ath-u.5
for
PYM

.
gma-u.5
for
100820219

.
gma-u.5
for
100791525

.
vvi-u.5
for
100249740

.
ppo-u.5
for
18096628

.
ppo-u.5
for
18094902

.
mtr-u.5
for
11423581

.
sly-u.5
for
101261756

.
osa-u.5
for
4332324

.
zma-u.5
for
100273358

.
zma-u.5
for
100283795

.


Ortholog ID: 7027
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PYM LOC100791525 LOC100820219 LOC101261756 LOC4332324 LOC100283795 LOC100273358 LOC103836238 LOC103871898 LOC100249740 LOC18094902 LOC18096628 LOC11423581 LOC123085354 LOC123097989 LOC123449096 LOC107921171 LOC107925364 LOC106362144 LOC106364528 CHLRE_06g279250v5 LOC110431782 LOC102592344 LOC102628798 LOC100837845 LOC107773864 LOC107807981
Function* partner of Y14-MAGO partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago PYM protein partner of Y14-MAGO partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago-like uncharacterized protein partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago partner of Y14 and mago-like partner of Y14 and mago
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 8
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 5
hvu04141 Protein processing in endoplasmic reticulum 5
hvu00513 Various types of N-glycan biosynthesis 4
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03013 Nucleocytoplasmic transport 2
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837682 100791525 100820219 101261756 4332324 100283795 100273358 103836238 103871898 100249740 18094902 18096628 11423581 123085354 123097989 123449096 107921171 107925364 106362144 106364528 5720877 110431782 102592344 102628798 100837845 107773864 107807981
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