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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106350979   eukaryotic initiation factor 4A-1 
 bna-r.1   125602317   eukaryotic initiation factor 4A-1-like 
 bna-r.1   106389163   eukaryotic initiation factor 4A-1 
 bna-r.1   106381289   eukaryotic initiation factor 4A-3 
 bra-r.6   103832621   eukaryotic initiation factor 4A-1 
 bra-r.6   103852798   eukaryotic initiation factor 4A-3 
 bra-r.6   103842486   eukaryotic initiation factor 4A-1 
 ath-u.5   EIF4A1   eukaryotic translation initiation factor 4A1 
 ath-u.5   EIF4A-2   eif4a-2 
 ath-u.5   AT1G72730   DEA(D/H)-box RNA helicase family protein 
 ghi-r.1   107962830   eukaryotic initiation factor 4A-8 
 ghi-r.1   107891725   eukaryotic initiation factor 4A-8 
 ghi-r.1   107907020   eukaryotic initiation factor 4A-9 
 cit-r.1   102624112   eukaryotic initiation factor 4A-11 
 cit-r.1   102621232   eukaryotic initiation factor 4A-8 
 gma-u.5   100806638   eukaryotic initiation factor 4A-11 
 gma-u.5   100817948   eukaryotic initiation factor 4A-10 
 gma-u.5   100809918   eukaryotic initiation factor 4A-10 
 vvi-u.5   100261822   eukaryotic initiation factor 4A-8 
 vvi-u.5   100249159   eukaryotic initiation factor 4A-11 
 ppo-u.5   7470684   eukaryotic initiation factor 4A-9 
 ppo-u.5   7480809   eukaryotic initiation factor 4A-8 
 ppo-u.5   112325060   eukaryotic initiation factor 4A-15 
 mtr-u.5   25494213   uncharacterized LOC25494213 
 mtr-u.5   11434749   eukaryotic initiation factor 4A-11 
 mtr-u.5   11418913   eukaryotic initiation factor 4A-10 
 sly-u.5   101266108   eukaryotic initiation factor 4A-2 
 sly-u.5   101266405   eukaryotic initiation factor 4A-2 
 sly-u.5   104648456   eukaryotic initiation factor 4A-9-like 
 sot-r.1   102595069   eukaryotic initiation factor 4A-2 
 sot-r.1   102595924   eukaryotic initiation factor 4A-15 
 nta-r.1   107827700   eukaryotic initiation factor 4A-15-like 
 nta-r.1   107814763   eukaryotic initiation factor 4A-15-like 
 nta-r.1   107805180   eukaryotic initiation factor 4A-8-like 
 osa-u.5   4328286   eukaryotic initiation factor 4A-3-like 
 osa-u.5   4341966   eukaryotic initiation factor 4A-1-like 
 zma-u.5   542348   translational initiation factor eIF-4A 
 zma-u.5   100284697   uncharacterized LOC100284697 
 zma-u.5   541649   translation initiation factor 
 tae-r.2   123137029   uncharacterized LOC123137029 
 tae-r.2   123127332   eukaryotic initiation factor 4A-10 
 tae-r.2   123163926   eukaryotic initiation factor 4A 
 hvu-r.1   123407112   ATP-dependent RNA helicase drs1-like 
 hvu-r.1   123406061   eukaryotic initiation factor 4A-1 
 hvu-r.1   123413668   eukaryotic initiation factor 4A 
 sbi-r.1   8073377   eukaryotic initiation factor 4A 
 sbi-r.1   8063831   eukaryotic initiation factor 4A-3 
 bdi-r.1   100843793   eukaryotic initiation factor 4A-1 
 bdi-r.1   100844278   ATP-dependent RNA helicase drs1 
 bdi-r.1   100844546   eukaryotic initiation factor 4A 
 cre-r.1   CHLRE_06g298650v5   uncharacterized protein 

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Top 50 coexpressed genes to 106350979 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106350979 (bna-r.1 coexpression data)

CoexMap"106350979"


bnaLOC106350979 | Entrez gene ID : 106350979    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 3 2 3 2 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (186 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013646256.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  pero 1,  chlo 1,  nucl 1  (predict for XP_013646256.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013646256.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106350979
bna-r.1
for
125602317
bna-r.1
for
106389163
bna-r.1
for
106381289
bra-r.6
for
103832621
bra-r.6
for
103852798
bra-r.6
for
103842486
ath-u.5
for
EIF4A1
ath-u.5
for
EIF4A-2
ath-u.5
for
AT1G72730
ghi-r.1
for
107962830
ghi-r.1
for
107891725
ghi-r.1
for
107907020
cit-r.1
for
102624112
cit-r.1
for
102621232
gma-u.5
for
100806638
gma-u.5
for
100817948
gma-u.5
for
100809918
vvi-u.5
for
100261822
vvi-u.5
for
100249159
ppo-u.5
for
7470684
ppo-u.5
for
7480809
ppo-u.5
for
112325060
mtr-u.5
for
25494213
mtr-u.5
for
11434749
mtr-u.5
for
11418913
sly-u.5
for
101266108
sly-u.5
for
101266405
sly-u.5
for
104648456
sot-r.1
for
102595069
sot-r.1
for
102595924
nta-r.1
for
107827700
nta-r.1
for
107814763
nta-r.1
for
107805180
osa-u.5
for
4328286
osa-u.5
for
4341966
zma-u.5
for
542348
zma-u.5
for
100284697
zma-u.5
for
541649
tae-r.2
for
123137029
tae-r.2
for
123127332
tae-r.2
for
123163926
hvu-r.1
for
123407112
hvu-r.1
for
123406061
hvu-r.1
for
123413668
sbi-r.1
for
8073377
sbi-r.1
for
8063831
bdi-r.1
for
100843793
bdi-r.1
for
100844278
bdi-r.1
for
100844546
cre-r.1
for
CHLRE_06g298650v5


Ortholog ID: 725
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC125602317 LOC125575225 LOC106405668 LOC103832621 LOC103871060 LOC103859548 EIF4A1 EIF4A-2 AT1G72730 LOC107891725 LOC107915039 LOC107920144 LOC102624112 LOC102621232 LOC100817948 LOC100786735 LOC112999960 LOC100261822 LOC100249159 LOC7470684 LOC7480809 LOC112325060 LOC25494213 LOC11418913 LOC11444422 LOC104648456 LOC101244494 LOC101252510 LOC102595924 LOC102594403 LOC107814763 LOC107798115 LOC107777566 LOC4328286 LOC4341966 LOC542348 LOC100284697 LOC541649 LOC123137029 LOC123163926 LOC123136268 LOC123407112 LOC123406061 LOC123413668 LOC8073377 LOC8063831 LOC100843793 LOC100844278 LOC100844546 CHLRE_06g298650v5
Function* eukaryotic initiation factor 4A-1-like eukaryotic initiation factor 4A-1-like eukaryotic initiation factor 4A-3 eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-1 eukaryotic translation initiation factor 4A1 eif4a-2 DEA(D/H)-box RNA helicase family protein eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-14 eukaryotic initiation factor 4A-11 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-10 eukaryotic initiation factor 4A-15-like eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-11 eukaryotic initiation factor 4A-9 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-15 uncharacterized LOC25494213 eukaryotic initiation factor 4A-10 eukaryotic initiation factor 4A-10 eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-2 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-2-like eukaryotic initiation factor 4A-15-like eukaryotic initiation factor 4A-14-like eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-3-like eukaryotic initiation factor 4A-1-like translational initiation factor eIF-4A uncharacterized LOC100284697 translation initiation factor uncharacterized LOC123137029 eukaryotic initiation factor 4A eukaryotic initiation factor 4A-like ATP-dependent RNA helicase drs1-like eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A eukaryotic initiation factor 4A eukaryotic initiation factor 4A-3 eukaryotic initiation factor 4A-1 ATP-dependent RNA helicase drs1 eukaryotic initiation factor 4A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 3
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath01240 Biosynthesis of cofactors 3
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04145 Phagosome 3
ghi04148 Efferocytosis 3
ghi04814 Motor proteins 2
ghi00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit04120 Ubiquitin mediated proteolysis 3
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
gma03060 Protein export 2
gma00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03050 Proteasome 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr03015 mRNA surveillance pathway 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03013 Nucleocytoplasmic transport 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 7
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa03015 mRNA surveillance pathway 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa03040 Spliceosome 3
osa03008 Ribosome biogenesis in eukaryotes 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00310 Lysine degradation 2
tae00380 Tryptophan metabolism 2
tae00785 Lipoic acid metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu01200 Carbon metabolism 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 3
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125602317 125575225 106405668 103832621 103871060 103859548 820605 841868 843605 107891725 107915039 107920144 102624112 102621232 100817948 100786735 112999960 100261822 100249159 7470684 7480809 112325060 25494213 11418913 11444422 104648456 101244494 101252510 102595924 102594403 107814763 107798115 107777566 4328286 4341966 542348 100284697 541649 123137029 123163926 123136268 123407112 123406061 123413668 8073377 8063831 100843793 100844278 100844546 5717011
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