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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106351177   double-stranded RNA-binding protein 1-like 
 ath-u.5   HYL1   dsRNA-binding domain-like superfamily protein 
 gma-u.5   100806833   double-stranded RNA-binding protein 1 
 gma-u.5   100782651   double-stranded RNA-binding protein 1 
 vvi-u.5   100243781   double-stranded RNA-binding protein 1-like 
 ppo-u.5   7468848   double-stranded RNA-binding protein 1 
 ppo-u.5   7467230   double-stranded RNA-binding protein 1 
 mtr-u.5   11432283   double-stranded RNA-binding protein 1 
 sly-u.5   101257657   double-stranded RNA-binding protein 6 
 osa-u.5   4349575   double-stranded RNA-binding protein 7-like 
 zma-u.5   100284085   uncharacterized LOC100284085 

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Top 50 coexpressed genes to 106351177 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106351177 (bna-r.1 coexpression data)

CoexMap"106351177"


bnaLOC106351177 | Entrez gene ID : 106351177    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (6396 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (28 genes)  IEA  
GO:0003725 [list] [network] double-stranded RNA binding  (31 genes)  IEA  
Protein NP_001302780.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cyto_nucl 2,  cyto 1  (predict for NP_001302780.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001302780.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106351177
ath-u.5
for
HYL1
gma-u.5
for
100806833
gma-u.5
for
100782651
vvi-u.5
for
100243781
ppo-u.5
for
7468848
ppo-u.5
for
7467230
mtr-u.5
for
11432283
sly-u.5
for
101257657
osa-u.5
for
4349575
zma-u.5
for
100284085


Ortholog ID: 6396
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC106362373 LOC106351177 LOC103871744 LOC103836317 HYL1 LOC107942931 LOC107957827 LOC102616183 LOC100782651 LOC100806833 LOC100243781 LOC7468848 LOC7467230 LOC11432283 LOC101257657 LOC102603097 LOC107794992 LOC107803960 LOC4349575 LOC100284085 LOC123399981 LOC8055517 LOC100844921
Function* double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 dsRNA-binding domain-like superfamily protein double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 7-like uncharacterized LOC100284085 double-stranded RNA-binding protein 8-like double-stranded RNA-binding protein 8 double-stranded RNA-binding protein 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi04144 Endocytosis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 3
sot04141 Protein processing in endoplasmic reticulum 2
sot03013 Nucleocytoplasmic transport 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106362373 106351177 103871744 103836317 837498 107942931 107957827 102616183 100782651 100806833 100243781 7468848 7467230 11432283 101257657 102603097 107794992 107803960 4349575 100284085 123399981 8055517 100844921
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