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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111214597   nuclear transcription factor Y subunit B-5-like 
 bra-r.6   103858257   nuclear transcription factor Y subunit B-5 
 mtr-u.5   25484764   nuclear transcription factor Y subunit B-4 
 mtr-u.5   11422870   nuclear transcription factor Y subunit B-10 
 sot-r.1   102604580   nuclear transcription factor Y subunit B-5-like 
 sot-r.1   102582547   nuclear transcription factor Y subunit B-5-like 
 sot-r.1   102587650   nuclear transcription factor Y subunit B-5-like 
 nta-r.1   142171473   nuclear transcription factor Y subunit B-4-like 
 nta-r.1   107817309   nuclear transcription factor Y subunit B-4-like 
 osa-u.5   9266773   nuclear transcription factor Y subunit B-1 
 zma-u.5   103650792   nuclear transcription factor Y subunit B-1 
 zma-u.5   100304371   uncharacterized LOC100304371 
 hvu-r.1   123440797   nuclear transcription factor Y subunit B-1-like 
 sbi-r.1   8062279   nuclear transcription factor Y subunit B-1 

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Top 50 coexpressed genes to 111214597 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111214597 (bna-r.1 coexpression data)

CoexMap"106351187"


bnaLOC106351187 | Entrez gene ID : 106351187    
Species bna bra mtr sot nta osa zma hvu sbi vvi bdi sly tae ppo cre ath gma ghi cit
Paralog 1 1 2 3 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (71 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (54 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (268 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (792 genes)  IEA  
Protein XP_048638035.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 3,  chlo 2  (predict for XP_048638035.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048638035.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111214597
bra-r.6
for
103858257
mtr-u.5
for
25484764
mtr-u.5
for
11422870
sot-r.1
for
102604580
sot-r.1
for
102582547
sot-r.1
for
102587650
nta-r.1
for
142171473
nta-r.1
for
107817309
osa-u.5
for
9266773
zma-u.5
for
103650792
zma-u.5
for
100304371
hvu-r.1
for
123440797
sbi-r.1
for
8062279


Ortholog ID: 1199
Species bna bra mtr mtr sot sot nta nta nta osa zma hvu sbi
Symbol LOC111214597 LOC103858257 LOC11422870 LOC25481001 LOC102582547 LOC102587650 LOC142171473 LOC107782191 LOC107783462 LOC9266773 LOC103650792 LOC123440797 LOC8062279
Function* nuclear transcription factor Y subunit B-5-like nuclear transcription factor Y subunit B-5 nuclear transcription factor Y subunit B-10 nuclear transcription factor Y subunit B-1 nuclear transcription factor Y subunit B-5-like nuclear transcription factor Y subunit B-5-like nuclear transcription factor Y subunit B-4-like nuclear transcription factor Y subunit B-5-like nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-1 nuclear transcription factor Y subunit B-1 nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna03460 Fanconi anemia pathway 3
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
bna00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 4
osa00270 Cysteine and methionine metabolism 3
osa01230 Biosynthesis of amino acids 3
osa00670 One carbon pool by folate 3
osa00450 Selenocompound metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111214597 103858257 11422870 25481001 102582547 102587650 142171473 107782191 107783462 9266773 103650792 123440797 8062279
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