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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106353308   L-cysteine desulfhydrase 
 ath-u.5   LCD   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 ath-u.5   AT5G26600   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 gma-u.5   100786129   probable L-cysteine desulfhydrase, chloroplastic 
 gma-u.5   100787528   L-cysteine desulfhydrase 
 gma-u.5   100793745   probable L-cysteine desulfhydrase, chloroplastic 
 vvi-u.5   100243446   L-cysteine desulfhydrase 
 vvi-u.5   100244282   probable L-cysteine desulfhydrase, chloroplastic 
 ppo-u.5   7481444   L-cysteine desulfhydrase 
 ppo-u.5   7465209   probable L-cysteine desulfhydrase, chloroplastic 
 ppo-u.5   18098456   probable L-cysteine desulfhydrase, chloroplastic 
 mtr-u.5   25485791   probable L-cysteine desulfhydrase, chloroplastic 
 mtr-u.5   11407630   L-cysteine desulfhydrase 
 mtr-u.5   11432056   probable L-cysteine desulfhydrase, chloroplastic 
 sly-u.5   101267603   probable L-cysteine desulfhydrase, chloroplastic 
 sly-u.5   101258894   L-cysteine desulfhydrase 
 osa-u.5   4325155   putative L-cysteine desulfhydrase 1 
 osa-u.5   4325157   putative L-cysteine desulfhydrase 2 
 zma-u.5   100193096   putative L-cysteine desulfhydrase chloroplastic 
 zma-u.5   100284775   uncharacterized LOC100284775 

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Top 50 coexpressed genes to 106353308 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106353308 (bna-r.1 coexpression data)

CoexMap"106353308"


bnaLOC106353308 | Entrez gene ID : 106353308    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 3 2 3 3 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00270 [list] [network] Cysteine and methionine metabolism (398 genes)
GO BP
GO CC
GO MF
Protein XP_013648503.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_013648503.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013648503.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106353308
ath-u.5
for
LCD
ath-u.5
for
AT5G26600
gma-u.5
for
100786129
gma-u.5
for
100787528
gma-u.5
for
100793745
vvi-u.5
for
100243446
vvi-u.5
for
100244282
ppo-u.5
for
7481444
ppo-u.5
for
7465209
ppo-u.5
for
18098456
mtr-u.5
for
25485791
mtr-u.5
for
11407630
mtr-u.5
for
11432056
sly-u.5
for
101267603
sly-u.5
for
101258894
osa-u.5
for
4325155
osa-u.5
for
4325157
zma-u.5
for
100193096
zma-u.5
for
100284775


Ortholog ID: 3241
Species bna bna bra ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC106348582 LOC111211374 LOC103830344 LCD AT5G26600 LOC107916839 LOC107912242 LOC107177301 LOC102626410 LOC100796732 LOC100787528 LOC100244282 LOC100243446 LOC7495177 LOC18098456 LOC11407630 LOC11432056 LOC101258894 LOC101267603 LOC102586162 LOC102604167 LOC107762255 LOC107809393 LOC4325155 LOC4325157 LOC100193096 LOC100284775 LOC123069953 LOC123061159 LOC123443573 LOC8078148 LOC110433861 LOC100844459 CHLRE_07g337000v5
Function* probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase L-cysteine desulfhydrase Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Pyridoxal phosphate (PLP)-dependent transferases superfamily protein L-cysteine desulfhydrase L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic probable L-cysteine desulfhydrase, chloroplastic probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase probable L-cysteine desulfhydrase, chloroplastic L-cysteine desulfhydrase putative L-cysteine desulfhydrase, chloroplastic putative L-cysteine desulfhydrase 1 putative L-cysteine desulfhydrase 2 putative L-cysteine desulfhydrase chloroplastic uncharacterized LOC100284775 putative L-cysteine desulfhydrase 1 putative L-cysteine desulfhydrase 1 putative L-cysteine desulfhydrase 1 putative L-cysteine desulfhydrase 2 putative L-cysteine desulfhydrase 1 putative L-cysteine desulfhydrase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00966 Glucosinolate biosynthesis 8
bna00380 Tryptophan metabolism 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath00270 Cysteine and methionine metabolism 2
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 7
ath00380 Tryptophan metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 7
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 4
sbi00785 Lipoic acid metabolism 4
sbi01200 Carbon metabolism 4
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106348582 111211374 103830344 825386 832730 107916839 107912242 107177301 102626410 100796732 100787528 100244282 100243446 7495177 18098456 11407630 11432056 101258894 101267603 102586162 102604167 107762255 107809393 4325155 4325157 100193096 100284775 123069953 123061159 123443573 8078148 110433861 100844459 5725638
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