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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106354316   transcription initiation factor TFIID subunit 2 
 ath-u.5   TAF2   TBP-associated factor 2 
 gma-u.5   100803129   transcription initiation factor TFIID subunit 2 
 gma-u.5   100792795   transcription initiation factor TFIID subunit 2 
 vvi-u.5   100266355   transcription initiation factor TFIID subunit 2 
 ppo-u.5   18105528   transcription initiation factor TFIID subunit 2 
 mtr-u.5   25481544   transcription initiation factor TFIID subunit 2 
 sly-u.5   101259036   transcription initiation factor TFIID subunit 2 
 osa-u.5   4347029   transcription initiation factor TFIID subunit 2 
 zma-u.5   103649142   transcription initiation factor TFIID subunit 2 
 zma-u.5   103634102   transcription initiation factor TFIID subunit 2 

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Top 50 coexpressed genes to 106354316 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106354316 (bna-r.1 coexpression data)

CoexMap"106354316"


bnaLOC106354316 | Entrez gene ID : 106354316    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03022 [list] [network] Basal transcription factors (161 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (114 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (56 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (57 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (266 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (399 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (1304 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
Protein XP_013649680.2 [sequence] [blastp]
XP_013649682.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  cysk 1,  cyto_plas 1  (predict for XP_013649680.2)
nucl 5,  cyto 2,  cysk 1,  cyto_plas 1  (predict for XP_013649682.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013649680.2)
other 7  (predict for XP_013649682.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106354316
ath-u.5
for
TAF2
gma-u.5
for
100803129
gma-u.5
for
100792795
vvi-u.5
for
100266355
ppo-u.5
for
18105528
mtr-u.5
for
25481544
sly-u.5
for
101259036
osa-u.5
for
4347029
zma-u.5
for
103649142
zma-u.5
for
103634102


Ortholog ID: 7854
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi bdi cre
Symbol LOC106354316 LOC111207081 LOC103831869 TAF2 LOC107953669 LOC121203593 LOC102613880 LOC100803129 LOC100792795 LOC100266355 LOC18105528 LOC25481544 LOC101259036 LOC102578835 LOC107824526 LOC107811791 LOC4347029 LOC103649142 LOC103634102 LOC123121491 LOC123103714 LOC123428476 LOC123396501 LOC8055807 LOC100821849 CHLRE_13g583500v5
Function* transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2-like transcription initiation factor TFIID subunit 2 TBP-associated factor 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2-like transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 3
bna03022 Basal transcription factors 2
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03040 Spliceosome 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106354316 111207081 103831869 843733 107953669 121203593 102613880 100803129 100792795 100266355 18105528 25481544 101259036 102578835 107824526 107811791 4347029 103649142 103634102 123121491 123103714 123428476 123396501 8055807 100821849 5719359
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