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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106354434   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 bna-r.1   125575264   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 bra-r.6   103851081   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 ath-u.5   AT5G17070   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ghi-r.1   107955772   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 ghi-r.1   107954829   transcription factor GTE8 
 cit-r.1   102608047   uncharacterized LOC102608047 
 gma-u.5   100803269   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 gma-u.5   100527622   uncharacterized LOC100527622 
 vvi-u.5   100242589   uncharacterized LOC100242589 
 ppo-u.5   18108308   uncharacterized LOC18108308 
 mtr-u.5   11441662   serine/threonine-protein phosphatase 4 regulatory subunit 2-A 
 sly-u.5   101262493   uncharacterized LOC101262493 
 sot-r.1   102594659   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 nta-r.1   107776329   uncharacterized LOC107776329 
 nta-r.1   107769224   uncharacterized LOC107769224 
 osa-u.5   4340824   uncharacterized LOC4340824 
 zma-u.5   100216692   uncharacterized LOC100216692 
 tae-r.2   123150437   serine/threonine-protein phosphatase 4 regulatory subunit 2-A 
 tae-r.2   123156649   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 tae-r.2   123164664   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 hvu-r.1   123407290   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 sbi-r.1   8076434   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 bdi-r.1   100821792   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 cre-r.1   CHLRE_10g463700v5   uncharacterized protein 

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Top 50 coexpressed genes to 106354434 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106354434 (bna-r.1 coexpression data)

CoexMap"106354434"


bnaLOC106354434 | Entrez gene ID : 106354434    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (391 genes)  IEA  
GO CC
GO:0030289 [list] [network] protein phosphatase 4 complex  (13 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (224 genes)  IEA  
Protein XP_013649817.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  nucl_plas 5,  plas 4  (predict for XP_013649817.2)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for XP_013649817.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106354434
bna-r.1
for
125575264
bra-r.6
for
103851081
ath-u.5
for
AT5G17070
ghi-r.1
for
107955772
ghi-r.1
for
107954829
cit-r.1
for
102608047
gma-u.5
for
100803269
gma-u.5
for
100527622
vvi-u.5
for
100242589
ppo-u.5
for
18108308
mtr-u.5
for
11441662
sly-u.5
for
101262493
sot-r.1
for
102594659
nta-r.1
for
107776329
nta-r.1
for
107769224
osa-u.5
for
4340824
zma-u.5
for
100216692
tae-r.2
for
123150437
tae-r.2
for
123156649
tae-r.2
for
123164664
hvu-r.1
for
123407290
sbi-r.1
for
8076434
bdi-r.1
for
100821792
cre-r.1
for
CHLRE_10g463700v5


Ortholog ID: 9669
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106354434 LOC125575264 LOC103851081 AT5G17070 LOC107955772 LOC107954829 LOC102608047 LOC100803269 LOC100527622 LOC100242589 LOC18108308 LOC11441662 LOC101262493 LOC102594659 LOC107776329 LOC107769224 LOC4340824 LOC100216692 LOC123150437 LOC123156649 LOC123164664 LOC123407290 LOC8076434 LOC100821792 CHLRE_10g463700v5
Function* serine/threonine-protein phosphatase 4 regulatory subunit 2-like serine/threonine-protein phosphatase 4 regulatory subunit 2-like serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit-like protein serine/threonine-protein phosphatase 4 regulatory subunit 2 transcription factor GTE8 uncharacterized LOC102608047 serine/threonine-protein phosphatase 4 regulatory subunit 2-like uncharacterized LOC100527622 uncharacterized LOC100242589 uncharacterized LOC18108308 serine/threonine-protein phosphatase 4 regulatory subunit 2-A uncharacterized LOC101262493 serine/threonine-protein phosphatase 4 regulatory subunit 2 uncharacterized LOC107776329 uncharacterized LOC107769224 uncharacterized LOC4340824 uncharacterized LOC100216692 serine/threonine-protein phosphatase 4 regulatory subunit 2-A serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00230 Purine metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00770 Pantothenate and CoA biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03050 Proteasome 2
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 3
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03008 Ribosome biogenesis in eukaryotes 2
cre04712 Circadian rhythm - plant 2
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106354434 125575264 103851081 831570 107955772 107954829 102608047 100803269 100527622 100242589 18108308 11441662 101262493 102594659 107776329 107769224 4340824 100216692 123150437 123156649 123164664 123407290 8076434 100821792 66055171
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