ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106356377	uncharacterized LOC106356377
ath-u.5	AT3G16220	Putative eukaryotic LigT
ath-u.5	AT3G16230	Putative eukaryotic LigT
gma-u.5	100785531	uncharacterized LOC100785531
vvi-u.5	100266864	uncharacterized LOC100266864
ppo-u.5	7475086	uncharacterized LOC7475086
mtr-u.5	11420973	uncharacterized LOC11420973
sly-u.5	101268850	uncharacterized LOC101268850
sly-u.5	101249781	uncharacterized LOC101249781
osa-u.5	4325893	uncharacterized LOC4325893
osa-u.5	4325894	uncharacterized LOC4325894
zma-u.5	103649543	Activating signal cointegrator 1 complex subunit 1

functional annotation

KEGG

GO BP

GO:0006307 [list] [network] DNA alkylation repair	(12 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(5322 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

Protein

XP_013651593.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, chlo_mito 4, cyto 1, nucl 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_013651593.2)

Subcellular
localization
TargetP

other 5

(predict for XP_013651593.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106356377	ath-u.5 for AT3G16220	ath-u.5 for AT3G16230	gma-u.5 for 100785531	vvi-u.5 for 100266864	ppo-u.5 for 7475086	mtr-u.5 for 11420973	sly-u.5 for 101268850	sly-u.5 for 101249781	osa-u.5 for 4325893	osa-u.5 for 4325894	zma-u.5 for 103649543

Ortholog ID: 4548

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

activating signal cointegrator 1 complex subunit 1

uncharacterized LOC103840105

uncharacterized LOC103840113

Putative eukaryotic LigT

uncharacterized LOC107950695

uncharacterized LOC107889109

uncharacterized LOC102623371

uncharacterized LOC100785531

uncharacterized LOC100266864

uncharacterized LOC7475086

uncharacterized LOC11420973

uncharacterized LOC101268850

uncharacterized LOC101249781

activating signal cointegrator 1 complex subunit 1

activating signal cointegrator 1 complex subunit 1-like

uncharacterized LOC107814231

uncharacterized LOC107802500

uncharacterized LOC4325893

uncharacterized LOC4325894

Activating signal cointegrator 1 complex subunit 1

activating signal cointegrator 1 complex subunit 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	5
nta03013	Nucleocytoplasmic transport	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	5
nta03013	Nucleocytoplasmic transport	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

106439436

106358143

103840105

103840113

820868

820869

107950695

107889109

102623371

100785531

100266864

7475086

11420973

101268850

101249781

102596069

102605557

107814231

107802500

4325893

4325894

103649543

123060803

123069365

123443263

8078103

100837554

5725856

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106356377 (bna-r.1 coexpression data)

Top 50 enrichment test to 106356377 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	1	1	1	2	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106356377 (bna-r.1 coexpression data)

Top 50 enrichment test to 106356377 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**