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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106357889  putative pentatricopeptide repeat-containing protein At3g23330 
 ath-u.5  AT3G23330  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100810402  putative pentatricopeptide repeat-containing protein At3g23330 
 vvi-u.5  100262037  putative pentatricopeptide repeat-containing protein At3g23330 
 ppo-u.5  18094773  putative pentatricopeptide repeat-containing protein At3g23330 
 mtr-u.5  11406568  putative pentatricopeptide repeat-containing protein At3g23330 
 sly-u.5  101254838  putative pentatricopeptide repeat-containing protein At3g23330 
 osa-u.5  4343715  putative pentatricopeptide repeat-containing protein At3g23330 
 zma-u.5  100216998  uncharacterized LOC100216998 

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Top 50 coexpressed genes to 106357889 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106357889 (bna-r.1 coexpression data)

CoexMap"106357889"


bnaLOC106357889 | Entrez gene ID : 106357889
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_022544382.2 [sequence] [blastp]
XP_048592529.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_022544382.2)
chlo 4,  cyto 2,  vacu 2,  mito 1,  cyto_plas 1  (predict for XP_048592529.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_022544382.2)
mito 7  (predict for XP_048592529.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106357889


ath-u.5
for
AT3G23330


gma-u.5
for
100810402


vvi-u.5
for
100262037


ppo-u.5
for
18094773


mtr-u.5
for
11406568


sly-u.5
for
101254838


osa-u.5
for
4343715


zma-u.5
for
100216998



Ortholog ID: 11322
Species bna bna bra ath ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106357889 LOC106421405 LOC103828751 AT3G23330 LOC107893115 LOC102615668 LOC100810402 LOC100262037 LOC18094773 LOC11406568 LOC101254838 LOC102584647 LOC107810444 LOC107759037 LOC4343715 LOC100216998 LOC123044129 LOC123187877 LOC123425218 LOC8054272 LOC100828742
Function* putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 uncharacterized LOC100216998 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106357889 106421405 103828751 821914 107893115 102615668 100810402 100262037 18094773 11406568 101254838 102584647 107810444 107759037 4343715 100216998 123044129 123187877 123425218 8054272 100828742
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