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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106358595   ethylene-responsive transcription factor RAP2-7-like 
 ath-u.5   SMZ   Integrase-type DNA-binding superfamily protein 
 ath-u.5   TOE3   target of early activation tagged (EAT) 3 
 ath-u.5   RAP2.7   uncharacterized protein 
 gma-u.5   100794096   floral homeotic protein APETALA 2 
 gma-u.5   100796271   ethylene-responsive transcription factor RAP2-7 
 gma-u.5   100801975   floral homeotic protein APETALA 2 
 vvi-u.5   AP2   transcription factor APETALA2 
 vvi-u.5   100263240   AP2-like ethylene-responsive transcription factor TOE3 
 ppo-u.5   7465291   APETALA2-like protein 3 
 ppo-u.5   7462600   floral homeotic protein APETALA 2 
 ppo-u.5   18100239   APETALA2-like protein 3 
 mtr-u.5   25493474   floral homeotic protein APETALA 2 
 mtr-u.5   11406478   ethylene-responsive transcription factor RAP2-7 
 mtr-u.5   11407832   floral homeotic protein APETALA 2 
 sly-u.5   AP2b   APETALA2-like protein AP2b 
 sly-u.5   AP2d   APETALA2-like protein AP2d 
 sly-u.5   AP2c   APETALA2-like protein AP2c 
 osa-u.5   4337654   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.5   4334582   APETALA2-like protein 2 
 osa-u.5   4342787   APETALA2-like protein 3 
 zma-u.5   100381947   uncharacterized LOC100381947 
 zma-u.5   732805   glossy15 
 zma-u.5   100271892   sister of indeterminate spikelet 1 

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Top 50 coexpressed genes to 106358595 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106358595 (bna-r.1 coexpression data)

CoexMap"106358595"


bnaLOC106358595 | Entrez gene ID : 106358595    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 3 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013653876.2 [sequence] [blastp]
XP_013653877.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013653876.2)
nucl 10  (predict for XP_013653877.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013653876.2)
other 8  (predict for XP_013653877.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106358595
ath-u.5
for
SMZ
ath-u.5
for
TOE3
ath-u.5
for
RAP2.7
gma-u.5
for
100794096
gma-u.5
for
100796271
gma-u.5
for
100801975
vvi-u.5
for
AP2
vvi-u.5
for
100263240
ppo-u.5
for
7465291
ppo-u.5
for
7462600
ppo-u.5
for
18100239
mtr-u.5
for
25493474
mtr-u.5
for
11406478
mtr-u.5
for
11407832
sly-u.5
for
AP2b
sly-u.5
for
AP2d
sly-u.5
for
AP2c
osa-u.5
for
4337654
osa-u.5
for
4334582
osa-u.5
for
4342787
zma-u.5
for
100381947
zma-u.5
for
732805
zma-u.5
for
100271892


Ortholog ID: 395
Species bna bna bra bra ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC106423299 LOC125594129 LOC103851522 LOC103829531 TOE2 SNZ LOC107913226 LOC107959062 LOC102622542 LOC102606994 LOC100808212 LOC100797238 AP2 LOC100246815 LOC18100239 LOC7465291 LOC11406478 LOC11407832 LOC101259280 AP2c LOC102605336 LOC102582568 LOC107764494 LOC107803429 LOC4342787 LOC9269072 LOC100271892 LOC100280414 LOC123123462 LOC123428148 LOC123453013 LOC8068364 LOC8057377 LOC100831490 LOC100825522 CHLRE_08g383000v5 CHLRE_01g009650v5
Function* floral homeotic protein APETALA 2 floral homeotic protein APETALA 2-like AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE3 target of early activation tagged (EAT) 2 Integrase-type DNA-binding superfamily protein floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 APETALA2-like protein 3 transcription factor APETALA2 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7-like APETALA2-like protein AP2c ethylene-responsive transcription factor RAP2-7-like floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 APETALA2-like protein 3 AP2-like ethylene-responsive transcription factor TOE3 sister of indeterminate spikelet 1 uncharacterized LOC100280414 APETALA2-like protein 2 APETALA2-like protein 5 APETALA2-like protein 2 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2/ERF and B3 domain-containing transcription factor ARF14-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 9
ghi01320 Sulfur cycle 7
ghi00230 Purine metabolism 4
ghi00261 Monobactam biosynthesis 4
ghi00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106423299 125594129 103851522 103829531 836134 818510 107913226 107959062 102622542 102606994 100808212 100797238 100268051 100246815 18100239 7465291 11406478 11407832 101259280 100736534 102605336 102582568 107764494 107803429 4342787 9269072 100271892 100280414 123123462 123428148 123453013 8068364 8057377 100831490 100825522 5719829 5725812
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