ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106361982	2-hydroxy-palmitic acid dioxygenase mpo1
bna-r.1	BNAC08G18270D	2-hydroxy-palmitic acid dioxygenase mpo1
bna-r.1	BNAANNG22530D	2-hydroxy-palmitic acid dioxygenase MPO1
bna-r.1	106368885	2-hydroxy-palmitic acid dioxygenase mpo1-like
bra-r.6	103842685	uncharacterized endoplasmic reticulum membrane protein YGL010W
bra-r.6	103835886	uncharacterized endoplasmic reticulum membrane protein C16E8.02
bra-r.6	103831918	uncharacterized endoplasmic reticulum membrane protein YGL010W
ath-u.5	AT1G18720	ER membrane protein, putative (DUF962)
ath-u.5	AT1G74440	ER membrane protein, putative (DUF962)
ghi-r.1	107942913	2-hydroxy-palmitic acid dioxygenase mpo1
ghi-r.1	107953521	2-hydroxy-palmitic acid dioxygenase mpo1
ghi-r.1	107926718	2-hydroxy-palmitic acid dioxygenase mpo1
cit-r.1	102607839	hypothetical protein
gma-u.5	100306243	uncharacterized LOC100306243
gma-u.5	100306677	uncharacterized LOC100306677
gma-u.5	100499802	uncharacterized LOC100499802
vvi-u.5	100246665	2-hydroxy-palmitic acid dioxygenase mpo1
vvi-u.5	100248185	2-hydroxy-palmitic acid dioxygenase mpo1
ppo-u.5	7460699	2-hydroxy-palmitic acid dioxygenase mpo1
ppo-u.5	7492926	2-hydroxy-palmitic acid dioxygenase mpo1
mtr-u.5	25490390	2-hydroxy-palmitic acid dioxygenase mpo1
mtr-u.5	11420118	2-hydroxy-palmitic acid dioxygenase mpo1
mtr-u.5	25490396	2-hydroxy-palmitic acid dioxygenase MPO1
sly-u.5	101248003	2-hydroxy-palmitic acid dioxygenase MPO1
sot-r.1	102595973	uncharacterized endoplasmic reticulum membrane protein C16E8.02
nta-r.1	107815968	2-hydroxy-palmitic acid dioxygenase MPO1
nta-r.1	107764649	2-hydroxy-palmitic acid dioxygenase MPO1
nta-r.1	107776277	2-hydroxy-palmitic acid dioxygenase MPO1
osa-u.5	4348591	2-hydroxy-palmitic acid dioxygenase MPO1
osa-u.5	4345653	2-hydroxy-palmitic acid dioxygenase MPO1
osa-u.5	4329767	2-hydroxy-palmitic acid dioxygenase MPO1
zma-u.5	100285954	uncharacterized LOC100285954
zma-u.5	100284635	uncharacterized LOC100284635
tae-r.2	123152486	2-hydroxy-palmitic acid dioxygenase MPO1
tae-r.2	123063175	2-hydroxy-palmitic acid dioxygenase MPO1
tae-r.2	123072076	2-hydroxy-palmitic acid dioxygenase MPO1
hvu-r.1	123407803	2-hydroxy-palmitic acid dioxygenase MPO1-like
hvu-r.1	123445291	2-hydroxy-palmitic acid dioxygenase MPO1-like
sbi-r.1	8055402	uncharacterized endoplasmic reticulum membrane protein YGL010W
sbi-r.1	8075666	uncharacterized endoplasmic reticulum membrane protein YGL010W
bdi-r.1	100839624	uncharacterized endoplasmic reticulum membrane protein YGL010W
bdi-r.1	100829513	uncharacterized endoplasmic reticulum membrane protein YGL010W
cre-r.1	CHLRE_12g499650v5	uncharacterized protein

Top 50 coexpressed genes to 106361982 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106361982 (bna-r.1 coexpression data)

CoexMap"106361982"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0046521 [list] [network] sphingoid catabolic process

(7 genes)

IEA

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(1651 genes)

IEA

GO MF

Protein

XP_013657250.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, cyto 2, E.R. 2, cyto_E.R. 2

(predict for XP_013657250.1)

Subcellular
localization
TargetP

other 7, scret 4

(predict for XP_013657250.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106361982	bna-r.1 for BNAC08G18270D	bna-r.1 for BNAANNG22530D	bna-r.1 for 106368885	bra-r.6 for 103842685	bra-r.6 for 103835886	bra-r.6 for 103831918	ath-u.5 for AT1G18720	ath-u.5 for AT1G74440	ghi-r.1 for 107942913	ghi-r.1 for 107953521	ghi-r.1 for 107926718	cit-r.1 for 102607839	gma-u.5 for 100306243	gma-u.5 for 100306677	gma-u.5 for 100499802	vvi-u.5 for 100246665	vvi-u.5 for 100248185	ppo-u.5 for 7460699	ppo-u.5 for 7492926	mtr-u.5 for 25490390	mtr-u.5 for 11420118	mtr-u.5 for 25490396	sly-u.5 for 101248003	sot-r.1 for 102595973	nta-r.1 for 107815968	nta-r.1 for 107764649	nta-r.1 for 107776277	osa-u.5 for 4348591	osa-u.5 for 4345653	osa-u.5 for 4329767	zma-u.5 for 100285954	zma-u.5 for 100284635	tae-r.2 for 123152486	tae-r.2 for 123063175	tae-r.2 for 123072076	hvu-r.1 for 123407803	hvu-r.1 for 123445291	sbi-r.1 for 8055402	sbi-r.1 for 8075666	bdi-r.1 for 100839624	bdi-r.1 for 100829513	cre-r.1 for CHLRE_12g499650v5

Ortholog

Ortholog ID: 2592

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

2-hydroxy-palmitic acid dioxygenase MPO1

2-hydroxy-palmitic acid dioxygenase mpo1-like

uncharacterized endoplasmic reticulum membrane protein YGL010W

uncharacterized endoplasmic reticulum membrane protein C16E8.02

uncharacterized endoplasmic reticulum membrane protein YGL010W

ER membrane protein, putative (DUF962)

2-hydroxy-palmitic acid dioxygenase mpo1

uncharacterized LOC107910913

hypothetical protein

uncharacterized LOC100306243

uncharacterized LOC100306677

uncharacterized LOC100499802

2-hydroxy-palmitic acid dioxygenase mpo1

2-hydroxy-palmitic acid dioxygenase MPO1

uncharacterized endoplasmic reticulum membrane protein C16E8.02

2-hydroxy-palmitic acid dioxygenase MPO1

2-hydroxy-palmitic acid dioxygenase MPO1-like

2-hydroxy-palmitic acid dioxygenase MPO1

uncharacterized LOC100285954

uncharacterized LOC100284635

2-hydroxy-palmitic acid dioxygenase MPO1

2-hydroxy-palmitic acid dioxygenase MPO1-like

uncharacterized endoplasmic reticulum membrane protein YGL010W

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	2
bna00500	Starch and sucrose metabolism	2
bna00999	Biosynthesis of various plant secondary metabolites	2
bna00051	Fructose and mannose metabolism	2
bna00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	7
bna00460	Cyanoamino acid metabolism	5
bna00500	Starch and sucrose metabolism	5
bna00999	Biosynthesis of various plant secondary metabolites	5
bna00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00510	N-Glycan biosynthesis	3
bra00513	Various types of N-glycan biosynthesis	3
bra04141	Protein processing in endoplasmic reticulum	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	3
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	6
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit04517	IgSF CAM signaling	2
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2
vvi00600	Sphingolipid metabolism	2
vvi00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00940	Phenylpropanoid biosynthesis	9
vvi01230	Biosynthesis of amino acids	4
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
vvi00941	Flavonoid biosynthesis	3
vvi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	5
ppo04144	Endocytosis	3
ppo04148	Efferocytosis	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	2
sot04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	3
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	3
tae00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	3
sbi04517	IgSF CAM signaling	3
sbi04814	Motor proteins	3
sbi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	2
bdi04144	Endocytosis	2
bdi04145	Phagosome	2
bdi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi02010	ABC transporters	2
bdi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

106369072

106404659

106404724

103842685

103835886

103831918

838454

843785

107942913

107918629

107910913

102607839

100306243

100306677

100499802

100246665

100248185

7460699

7492926

25490390

11420118

25490392

101248003

102595973

107815968

107776277

107789358

4348591

4345653

4329767

100285954

100284635

123165468

123407803

123445291

8055402

8075666

100839624

100829513

5716366

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	1	3	2	2	3	1	1	3	3	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106361982 (bna-r.1 coexpression data)

Top 50 enrichment test to 106361982 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**