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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106363873   E3 ubiquitin-protein ligase SPL1 
 bna-r.1   106375237   E3 ubiquitin-protein ligase SPL1 
 bna-r.1   106444951   E3 ubiquitin-protein ligase SPL1 
 bra-r.6   103836057   E3 ubiquitin-protein ligase SP1 
 bra-r.6   103842109   E3 ubiquitin-protein ligase SPL1 
 bra-r.6   103862748   E3 ubiquitin-protein ligase SPL1 
 ath-u.5   ZCF61   E3 Ubiquitin ligase family protein 
 ath-u.5   DAL1   E3 Ubiquitin ligase family protein 
 ghi-r.1   107912405   E3 ubiquitin-protein ligase SP1 
 ghi-r.1   121220225   E3 ubiquitin-protein ligase SP1 
 ghi-r.1   107924813   E3 ubiquitin-protein ligase SP1 
 cit-r.1   102630052   E3 ubiquitin-protein ligase SP1 
 cit-r.1   102629766   E3 ubiquitin-protein ligase SP1 
 gma-u.5   100800734   E3 ubiquitin-protein ligase SP1 
 gma-u.5   100803252   E3 ubiquitin-protein ligase SP1 
 vvi-u.5   100247743   E3 ubiquitin-protein ligase SP1 
 ppo-u.5   7457989   E3 ubiquitin-protein ligase SP1 
 sly-u.5   101250130   E3 ubiquitin-protein ligase SP1 
 sot-r.1   102601282   mitochondrial ubiquitin ligase activator of NFKB 1 
 nta-r.1   107795503   E3 ubiquitin-protein ligase SP1 
 nta-r.1   107769306   E3 ubiquitin-protein ligase SP1-like 
 osa-u.5   4344112   E3 ubiquitin-protein ligase SP1 
 zma-u.5   103647901   E3 ubiquitin-protein ligase SP1 
 zma-u.5   100193166   uncharacterized LOC100193166 
 tae-r.2   123043942   E3 ubiquitin-protein ligase SP1 
 tae-r.2   123187712   E3 ubiquitin-protein ligase SP1 
 tae-r.2   123051813   E3 ubiquitin-protein ligase SP1 
 hvu-r.1   123425000   E3 ubiquitin-protein ligase SP1 
 sbi-r.1   8072220   E3 ubiquitin-protein ligase SP1 
 bdi-r.1   100835811   E3 ubiquitin-protein ligase SP1 
 cre-r.1   CHLRE_03g169050v5   uncharacterized protein 

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Top 50 coexpressed genes to 106363873 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106363873 (bna-r.1 coexpression data)

CoexMap"106363873"


bnaLOC106363873 | Entrez gene ID : 106363873    
Species bna bra ath ghi cit gma vvi ppo sly sot nta osa zma tae hvu sbi bdi cre mtr
Paralog 3 3 2 3 2 2 1 1 1 1 2 1 2 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1065 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (3151 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1079 genes)  IEA  
Protein XP_048634213.1 [sequence] [blastp]
XP_048634214.1 [sequence] [blastp]
XP_048634215.1 [sequence] [blastp]
XP_048634216.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3  (predict for XP_048634213.1)
chlo 6,  cyto 3  (predict for XP_048634214.1)
chlo 6,  cyto 2,  nucl 1,  mito 1  (predict for XP_048634215.1)
chlo 6,  cyto 2,  nucl 1,  mito 1  (predict for XP_048634216.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_048634213.1)
scret 3  (predict for XP_048634214.1)
scret 2  (predict for XP_048634215.1)
scret 2  (predict for XP_048634216.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106363873
bna-r.1
for
106375237
bna-r.1
for
106444951
bra-r.6
for
103836057
bra-r.6
for
103842109
bra-r.6
for
103862748
ath-u.5
for
ZCF61
ath-u.5
for
DAL1
ghi-r.1
for
107912405
ghi-r.1
for
121220225
ghi-r.1
for
107924813
cit-r.1
for
102630052
cit-r.1
for
102629766
gma-u.5
for
100800734
gma-u.5
for
100803252
vvi-u.5
for
100247743
ppo-u.5
for
7457989
sly-u.5
for
101250130
sot-r.1
for
102601282
nta-r.1
for
107795503
nta-r.1
for
107769306
osa-u.5
for
4344112
zma-u.5
for
103647901
zma-u.5
for
100193166
tae-r.2
for
123043942
tae-r.2
for
123187712
tae-r.2
for
123051813
hvu-r.1
for
123425000
sbi-r.1
for
8072220
bdi-r.1
for
100835811
cre-r.1
for
CHLRE_03g169050v5


Ortholog ID: 4473
Species bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106375237 LOC106450566 LOC103836057 LOC103842109 LOC103838246 ZCF61 DAL1 LOC121220225 LOC107924813 LOC107949932 LOC102630052 LOC102629766 LOC100800734 LOC100803252 LOC100247743 LOC7457989 LOC11417118 LOC101250130 LOC102601282 LOC107795503 LOC107769306 LOC4344112 LOC103647901 LOC100193166 LOC123043942 LOC123187712 LOC123051813 LOC123425000 LOC8072220 LOC100835811 CHLRE_03g169050v5
Function* E3 ubiquitin-protein ligase SPL1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SPL1 E3 ubiquitin-protein ligase SP1 E3 Ubiquitin ligase family protein E3 Ubiquitin ligase family protein E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 mitochondrial ubiquitin ligase activator of NFKB 1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1-like E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 uncharacterized LOC100193166 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00790 Folate biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi04075 Plant hormone signal transduction 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 3
sly00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106375237 106450566 103836057 103842109 103838246 842247 842693 121220225 107924813 107949932 102630052 102629766 100800734 100803252 100247743 7457989 11417118 101250130 102601282 107795503 107769306 4344112 103647901 100193166 123043942 123187712 123051813 123425000 8072220 100835811 5728972
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