ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106440634	mitochondrial inner membrane protease subunit 1
bna-r.1	106419471	mitochondrial inner membrane protease subunit 1
bra-r.6	103847248	mitochondrial inner membrane protease subunit 1
bra-r.6	103846754	mitochondrial inner membrane protease subunit 1
bra-r.6	103855898	mitochondrial inner membrane protease subunit 1
ath-u.5	AT1G29960	Peptidase S24/S26A/S26B/S26C family protein
ath-u.5	AT1G53530	Peptidase S24/S26A/S26B/S26C family protein
ghi-r.1	107895306	mitochondrial inner membrane protease subunit 1
ghi-r.1	107900393	mitochondrial inner membrane protease subunit 1
ghi-r.1	107905870	mitochondrial inner membrane protease subunit 1
cit-r.1	102623009	uncharacterized LOC102623009
cit-r.1	102612272	uncharacterized LOC102612272
gma-u.5	100805997	mitochondrial inner membrane protease subunit 1
gma-u.5	100527597	uncharacterized LOC100527597
gma-u.5	100526949	uncharacterized LOC100526949
vvi-u.5	100258854	mitochondrial ATP-independent inner membrane protease subunit 1a
vvi-u.5	100255515	mitochondrial ATP-independent inner membrane protease subunit 1a
ppo-u.5	7459129	uncharacterized LOC7459129
ppo-u.5	7457184	uncharacterized LOC7457184
ppo-u.5	7486379	uncharacterized LOC7486379
mtr-u.5	25501087	mitochondrial inner membrane protease subunit 1
mtr-u.5	11444107	mitochondrial inner membrane protease subunit 1
mtr-u.5	25487133	mitochondrial inner membrane protease subunit 1
sly-u.5	101266477	mitochondrial ATP-independent inner membrane protease subunit 1a
sly-u.5	101266091	mitochondrial ATP-independent inner membrane protease subunit 1a
sot-r.1	102592437	mitochondrial inner membrane protease subunit 1-like
sot-r.1	102593999	mitochondrial inner membrane protease subunit 1
nta-r.1	107818430	mitochondrial ATP-independent inner membrane protease subunit 1a
nta-r.1	107810070	mitochondrial ATP-independent inner membrane protease subunit 1a-like
nta-r.1	107775631	mitochondrial ATP-independent inner membrane protease subunit 1a
osa-u.5	4350939	mitochondrial ATP-independent inner membrane protease subunit 1a
zma-u.5	100384465	uncharacterized LOC100384465
zma-u.5	100282484	uncharacterized LOC100282484
zma-u.5	103651187	mitochondrial inner membrane protease subunit 2
tae-r.2	123135446	mitochondrial inner membrane protease subunit 1
tae-r.2	123143039	mitochondrial inner membrane protease subunit 1
tae-r.2	123129972	mitochondrial inner membrane protease subunit 1
hvu-r.1	123403806	mitochondrial inner membrane protease subunit 1
sbi-r.1	8068313	mitochondrial inner membrane protease subunit 1
sbi-r.1	8067474	mitochondrial inner membrane protease subunit 1
bdi-r.1	100831078	mitochondrial inner membrane protease subunit 1
cre-r.1	CHLRE_11g467655v5	uncharacterized protein

Top 50 coexpressed genes to 106440634 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106440634 (bna-r.1 coexpression data)

CoexMap"106364416"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03060 [list] [network] Protein export (201 genes)

GO BP

GO:0006627 [list] [network] protein processing involved in protein targeting to mitochondrion	(10 genes)	IEA
GO:0006465 [list] [network] signal peptide processing	(74 genes)	IEA

GO CC

GO:0042720 [list] [network] mitochondrial inner membrane peptidase complex	(10 genes)	IEA
GO:0016020 [list] [network] membrane	(9970 genes)	IEA

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity

(341 genes)

IEA

Protein

XP_048607853.1 [sequence] [blastp]
XP_048607854.1 [sequence] [blastp]
XP_048607855.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, mito 3, chlo 2	(predict for XP_048607853.1)
cyto 5, mito 3, chlo 2	(predict for XP_048607854.1)
cyto 5, mito 3, chlo 2	(predict for XP_048607855.1)

Subcellular
localization
TargetP

mito 8	(predict for XP_048607853.1)
mito 8	(predict for XP_048607854.1)
mito 8	(predict for XP_048607855.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106440634	bna-r.1 for 106419471	bra-r.6 for 103847248	bra-r.6 for 103846754	bra-r.6 for 103855898	ath-u.5 for AT1G29960	ath-u.5 for AT1G53530	ghi-r.1 for 107895306	ghi-r.1 for 107900393	ghi-r.1 for 107905870	cit-r.1 for 102623009	cit-r.1 for 102612272	gma-u.5 for 100805997	gma-u.5 for 100527597	gma-u.5 for 100526949	vvi-u.5 for 100258854	vvi-u.5 for 100255515	ppo-u.5 for 7459129	ppo-u.5 for 7457184	ppo-u.5 for 7486379	mtr-u.5 for 25501087	mtr-u.5 for 11444107	mtr-u.5 for 25487133	sly-u.5 for 101266477	sly-u.5 for 101266091	sot-r.1 for 102592437	sot-r.1 for 102593999	nta-r.1 for 107818430	nta-r.1 for 107810070	nta-r.1 for 107775631	osa-u.5 for 4350939	zma-u.5 for 100384465	zma-u.5 for 100282484	zma-u.5 for 103651187	tae-r.2 for 123135446	tae-r.2 for 123143039	tae-r.2 for 123129972	hvu-r.1 for 123403806	sbi-r.1 for 8068313	sbi-r.1 for 8067474	bdi-r.1 for 100831078	cre-r.1 for CHLRE_11g467655v5

Ortholog

Ortholog ID: 3171

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

mitochondrial inner membrane protease subunit 1

Peptidase S24/S26A/S26B/S26C family protein

mitochondrial inner membrane protease subunit 1

uncharacterized LOC102623009

uncharacterized LOC102612272

mitochondrial inner membrane protease subunit 1

uncharacterized LOC100526949

mitochondrial ATP-independent inner membrane protease subunit 1a

uncharacterized LOC7459129

uncharacterized LOC7457184

uncharacterized LOC7486379

mitochondrial inner membrane protease subunit 1

mitochondrial ATP-independent inner membrane protease subunit 1a

mitochondrial inner membrane protease subunit 1-like

mitochondrial inner membrane protease subunit 1

mitochondrial ATP-independent inner membrane protease subunit 1a

mitochondrial ATP-independent inner membrane protease subunit 1a-like

mitochondrial ATP-independent inner membrane protease subunit 1a

uncharacterized LOC100384465

uncharacterized LOC100282484

mitochondrial inner membrane protease subunit 2

mitochondrial inner membrane protease subunit 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	3
bna03060	Protein export	2
bna00280	Valine, leucine and isoleucine degradation	2
bna00410	beta-Alanine metabolism	2
bna00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2
ath03018	RNA degradation	2
ath03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi03060	Protein export	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	12
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	3
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta00750	Vitamin B6 metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	6
nta00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	5
osa03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	14
zma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17
zma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	8
zma03060	Protein export	3
zma00260	Glycine, serine and threonine metabolism	3
zma00750	Vitamin B6 metabolism	3
zma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13
tae00230	Purine metabolism	2
tae01232	Nucleotide metabolism	2
tae01240	Biosynthesis of cofactors	2
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	11
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	10
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	10
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3

Expression

Expression pattern

Entrez Gene ID^*

106419471

106413842

103847248

103846754

103855898

839874

841788

107895306

107905870

121229380

102623009

102612272

100805997

100526949

100258854

100255515

7459129

7457184

7486379

25501087

11444107

25487133

101266477

101266091

102592437

102593999

107818430

107810070

107775631

4350939

100384465

100282484

103651187

123135446

123143039

123129972

123403806

8068313

8067474

100831078

5724356

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	2	3	2	3	2	3	3	2	2	3	1	3	3	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106440634 (bna-r.1 coexpression data)

Top 50 enrichment test to 106440634 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**