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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106365562   ATP-dependent DNA helicase 2 subunit KU70-like 
 ath-u.5   KU70   ATP-dependent DNA helicase 2 subunit Ku70-like protein 
 gma-u.5   100775475   ATP-dependent DNA helicase 2 subunit KU70 
 vvi-u.5   100265198   ATP-dependent DNA helicase 2 subunit KU70 
 ppo-u.5   7472336   ATP-dependent DNA helicase 2 subunit KU70 
 mtr-u.5   11441760   ATP-dependent DNA helicase 2 subunit KU70 
 sly-u.5   101260670   ATP-dependent DNA helicase 2 subunit KU70 
 osa-u.5   4342584   ATP-dependent DNA helicase 2 subunit KU70-like 
 zma-u.5   100381505   ATP-dependent DNA helicase 2 subunit KU70 

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Top 50 coexpressed genes to 106365562 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106365562 (bna-r.1 coexpression data)

CoexMap"106365562"


bnaLOC106365562 | Entrez gene ID : 106365562    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03450 [list] [network] Non-homologous end-joining (13 genes)
GO BP
GO:0071480 [list] [network] cellular response to gamma radiation  (3 genes)  IEA  
GO:0071481 [list] [network] cellular response to X-ray  (3 genes)  IEA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (21 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (388 genes)  IEA  
GO CC
GO:0043564 [list] [network] Ku70:Ku80 complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0042162 [list] [network] telomeric DNA binding  (176 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (195 genes)  IEA  
GO:0003678 [list] [network] DNA helicase activity  (310 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (1590 genes)  IEA  
Protein XP_013660445.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1  (predict for XP_013660445.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013660445.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106365562
ath-u.5
for
KU70
gma-u.5
for
100775475
vvi-u.5
for
100265198
ppo-u.5
for
7472336
mtr-u.5
for
11441760
sly-u.5
for
101260670
osa-u.5
for
4342584
zma-u.5
for
100381505


Ortholog ID: 9781
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC106365562 LOC106346736 LOC103872484 KU70 LOC107917996 LOC107934687 LOC102627949 LOC100775475 LOC100265198 LOC7472336 LOC11441760 LOC101260670 LOC102580271 LOC107815516 LOC107780513 LOC4342584 LOC100381505 LOC123102253 LOC123119433 LOC123395481 LOC8060759 LOC8081583 LOC100829027 CHLRE_13g607500v5
Function* ATP-dependent DNA helicase 2 subunit KU70-like ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit Ku70-like protein ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70-like ATP-dependent DNA helicase 2 subunit KU70-like ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna04016 MAPK signaling pathway - plant 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 4
ghi03083 Polycomb repressive complex 3
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
sly03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 5
sot03450 Non-homologous end-joining 3
sot03460 Fanconi anemia pathway 3
sot03410 Base excision repair 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 6
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03030 DNA replication 4
nta03410 Base excision repair 4
nta03420 Nucleotide excision repair 4
nta03430 Mismatch repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03450 Non-homologous end-joining 5
tae03410 Base excision repair 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03450 Non-homologous end-joining 3
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03440 Homologous recombination 2
cre03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106365562 106346736 103872484 838268 107917996 107934687 102627949 100775475 100265198 7472336 11441760 101260670 102580271 107815516 107780513 4342584 100381505 123102253 123119433 123395481 8060759 8081583 100829027 5724650
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