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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G63480   mediator of RNA polymerase II transcription subunit 
 gma-u.5   100816835   mediator of RNA polymerase II transcription subunit 30 
 gma-u.5   100788627   mediator of RNA polymerase II transcription subunit 30 
 vvi-u.5   100264705   mediator of RNA polymerase II transcription subunit 30 
 ppo-u.5   7454727   mediator of RNA polymerase II transcription subunit 30 
 ppo-u.5   7454564   mediator of RNA polymerase II transcription subunit 30 
 mtr-u.5   11434561   mediator of RNA polymerase II transcription subunit 30 
 sly-u.5   101247238   mediator of RNA polymerase II transcription subunit 30 
 osa-u.5   9271345   mediator of RNA polymerase II transcription subunit 30 
 zma-u.5   100384016   Mediator of RNA polymerase II transcription subunit 30 
 zma-u.5   100279078   Mediator of RNA polymerase II transcription subunit 30 

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Top 50 coexpressed genes to AT5G63480 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G63480 (ath-u.5 coexpression data)

CoexMap"106366197"


bnaLOC106366197 | Entrez gene ID : 106366197    
Species ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
Protein XP_013661227.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_013661227.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013661227.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT5G63480

.
gma-u.5
for
100816835

.
gma-u.5
for
100788627

.
vvi-u.5
for
100264705

.
ppo-u.5
for
7454727

.
ppo-u.5
for
7454564

.
mtr-u.5
for
11434561

.
sly-u.5
for
101247238

.
osa-u.5
for
9271345

.
zma-u.5
for
100384016

.
zma-u.5
for
100279078

.


Ortholog ID: 7395
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi bdi nta nta
Symbol AT5G63480 LOC100788627 LOC100816835 LOC101247238 LOC9271345 LOC100384016 LOC100279078 LOC103837473 LOC100264705 LOC7454727 LOC7454564 LOC11434561 LOC123189056 LOC123053144 LOC123426541 LOC121226753 LOC121232044 LOC106348394 LOC8070965 LOC102589254 LOC102618213 LOC100826158 LOC100837441 LOC107785835 LOC107769730
Function* mediator of RNA polymerase II transcription subunit mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 Mediator of RNA polymerase II transcription subunit 30 Mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30 mediator of RNA polymerase II transcription subunit 30-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836467 100788627 100816835 101247238 9271345 100384016 100279078 103837473 100264705 7454727 7454564 11434561 123189056 123053144 123426541 121226753 121232044 106348394 8070965 102589254 102618213 100826158 100837441 107785835 107769730
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