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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106366378   exosome complex exonuclease RRP44 homolog A 
 ath-u.5   EMB2763   ribonuclease II family protein 
 gma-u.5   100806652   exosome complex exonuclease RRP44 homolog A 
 gma-u.5   100782456   exosome complex exonuclease RRP44 homolog A 
 vvi-u.5   100267912   exosome complex exonuclease RRP44 homolog A 
 ppo-u.5   18101070   exosome complex exonuclease RRP44 homolog A 
 mtr-u.5   11424636   exosome complex exonuclease RRP44 homolog A 
 sly-u.5   101263664   exosome complex exonuclease RRP44 homolog A 
 osa-u.5   4331494   exosome complex exonuclease RRP44 homolog A 
 zma-u.5   100194408   uncharacterized LOC100194408 

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Top 50 coexpressed genes to 106366378 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106366378 (bna-r.1 coexpression data)

CoexMap"106366378"


bnaLOC106366378 | Entrez gene ID : 106366378    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03018 [list] [network] RNA degradation (380 genes)
GO BP
GO:0016075 [list] [network] rRNA catabolic process  (18 genes)  IEA  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (28 genes)  IEA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (40 genes)  IEA  
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (96 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (1036 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013661433.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 3  (predict for XP_013661433.2)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_013661433.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106366378

.
ath-u.5
for
EMB2763

.
gma-u.5
for
100806652

.
gma-u.5
for
100782456

.
vvi-u.5
for
100267912

.
ppo-u.5
for
18101070

.
mtr-u.5
for
11424636

.
sly-u.5
for
101263664

.
osa-u.5
for
4331494

.
zma-u.5
for
100194408

.


Ortholog ID: 9983
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol EMB2763 LOC100782456 LOC100806652 LOC101263664 LOC4331494 LOC100194408 LOC103837810 LOC100267912 LOC18101070 LOC11424636 LOC123093577 LOC123098847 LOC123449790 LOC107954781 LOC107955297 LOC106401403 LOC106366378 CHLRE_14g613850v5 LOC8085691 LOC102613015 LOC100829846 LOC107765045 LOC107829893
Function* ribonuclease II family protein exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A uncharacterized LOC100194408 exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A uncharacterized protein exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A exosome complex exonuclease RRP44 homolog A-like exosome complex exonuclease RRP44 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03440 Homologous recombination 2
gma04120 Ubiquitin mediated proteolysis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma00514 Other types of O-glycan biosynthesis 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03013 Nucleocytoplasmic transport 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03015 mRNA surveillance pathway 4
tae03083 Polycomb repressive complex 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 3
hvu03440 Homologous recombination 3
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03018 RNA degradation 2
bdi03040 Spliceosome 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816257 100782456 100806652 101263664 4331494 100194408 103837810 100267912 18101070 11424636 123093577 123098847 123449790 107954781 107955297 106401403 106366378 66056185 8085691 102613015 100829846 107765045 107829893
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