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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106366483   protein PAM71, chloroplastic-like 
 bna-r.1   106382018   protein PAM71, chloroplastic 
 bra-r.6   103838139   protein PAM71, chloroplastic 
 ath-u.5   AT1G64150   Uncharacterized protein family (UPF0016) 
 ghi-r.1   121224333   GDT1-like protein 1, chloroplastic 
 ghi-r.1   107947069   GDT1-like protein 1, chloroplastic 
 cit-r.1   102630656   protein PAM71, chloroplastic 
 gma-u.5   100809618   GDT1-like protein 1, chloroplastic-like 
 ppo-u.5   7458210   protein PAM71, chloroplastic 
 mtr-u.5   11442400   protein PAM71, chloroplastic 
 sly-u.5   101268494   protein PAM71, chloroplastic 
 sot-r.1   102604818   GDT1-like protein 1, chloroplastic 
 nta-r.1   107825102   protein PAM71, chloroplastic 
 nta-r.1   107782819   protein PAM71, chloroplastic 
 osa-u.5   9272318   GDT1-like protein 1, chloroplastic 
 zma-u.5   103634990   GDT1-like protein 1, chloroplastic 
 tae-r.2   123077812   GDT1-like protein 1, chloroplastic 
 tae-r.2   123069290   GDT1-like protein 1, chloroplastic 
 tae-r.2   123060726   GDT1-like protein 1, chloroplastic 
 hvu-r.1   123443200   GDT1-like protein 1, chloroplastic 
 sbi-r.1   8079487   GDT1-like protein 1, chloroplastic 
 bdi-r.1   100846494   GDT1-like protein 1, chloroplastic 
 cre-r.1   CHLRE_02g084350v5   uncharacterized protein 

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Top 50 coexpressed genes to 106366483 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106366483 (bna-r.1 coexpression data)

CoexMap"106366483"


bnaLOC106366483 | Entrez gene ID : 106366483    
Species bna bra ath ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 2 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032468 [list] [network] Golgi calcium ion homeostasis  (15 genes)  IEA  
GO:0032472 [list] [network] Golgi calcium ion transport  (15 genes)  IEA  
GO:0071421 [list] [network] manganese ion transmembrane transport  (15 genes)  IEA  
GO:0070588 [list] [network] calcium ion transmembrane transport  (122 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1586 genes)  IEA  
GO MF
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (63 genes)  IEA  
GO:0015085 [list] [network] calcium ion transmembrane transporter activity  (130 genes)  IEA  
Protein XP_048595704.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_048595704.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048595704.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106366483
bna-r.1
for
106382018
bra-r.6
for
103838139
ath-u.5
for
AT1G64150
ghi-r.1
for
121224333
ghi-r.1
for
107947069
cit-r.1
for
102630656
gma-u.5
for
100809618
ppo-u.5
for
7458210
mtr-u.5
for
11442400
sly-u.5
for
101268494
sot-r.1
for
102604818
nta-r.1
for
107825102
nta-r.1
for
107782819
osa-u.5
for
9272318
zma-u.5
for
103634990
tae-r.2
for
123077812
tae-r.2
for
123069290
tae-r.2
for
123060726
hvu-r.1
for
123443200
sbi-r.1
for
8079487
bdi-r.1
for
100846494
cre-r.1
for
CHLRE_02g084350v5


Ortholog ID: 11510
Species bna bna bra ath ghi ghi cit gma ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106366483 LOC106382018 LOC103838139 AT1G64150 LOC121224333 LOC107947069 LOC102630656 LOC100809618 LOC7458210 LOC11442400 LOC101268494 LOC102604818 LOC107825102 LOC107782819 LOC9272318 LOC103634990 LOC123077812 LOC123069290 LOC123060726 LOC123443200 LOC8079487 LOC100846494 CHLRE_02g084350v5
Function* protein PAM71, chloroplastic-like protein PAM71, chloroplastic protein PAM71, chloroplastic Uncharacterized protein family (UPF0016) GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic protein PAM71, chloroplastic GDT1-like protein 1, chloroplastic-like protein PAM71, chloroplastic protein PAM71, chloroplastic protein PAM71, chloroplastic GDT1-like protein 1, chloroplastic protein PAM71, chloroplastic protein PAM71, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic GDT1-like protein 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00500 Starch and sucrose metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00500 Starch and sucrose metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00860 Porphyrin metabolism 4
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly00860 Porphyrin metabolism 4
sly01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106366483 106382018 103838139 842719 121224333 107947069 102630656 100809618 7458210 11442400 101268494 102604818 107825102 107782819 9272318 103634990 123077812 123069290 123060726 123443200 8079487 100846494 5727361
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