ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106447579	uncharacterized LOC106447579
bna-r.1	106431537	uncharacterized LOC106431537
bna-r.1	106419008	uncharacterized LOC106419008
bra-r.6	103866623	uncharacterized LOC103866623
bra-r.6	103847033	uncharacterized LOC103847033
ath-u.5	AT2G42320	nucleolar protein gar2-like protein
ath-u.5	AT3G01810	EEIG1/EHBP1 protein amino-terminal domain protein
ath-u.5	AT3G57780	nucleolar-like protein
ghi-r.1	107914210	uncharacterized LOC107914210
ghi-r.1	107891283	uncharacterized LOC107891283
cit-r.1	102623857	uncharacterized LOC102623857
cit-r.1	102622816	uncharacterized LOC102622816
cit-r.1	102611142	uncharacterized LOC102611142
gma-u.5	100818584	uncharacterized LOC100818584
gma-u.5	100783630	uncharacterized LOC100783630
gma-u.5	100804499	uncharacterized LOC100804499
vvi-u.5	100266440	uncharacterized LOC100266440
vvi-u.5	100254476	uncharacterized LOC100254476
vvi-u.5	100253823	uncharacterized LOC100253823
ppo-u.5	7467708	uncharacterized LOC7467708
ppo-u.5	7494780	uncharacterized LOC7494780
mtr-u.5	112422722	uncharacterized LOC112422722
mtr-u.5	11425070	uncharacterized LOC11425070
mtr-u.5	11440437	uncharacterized LOC11440437
sly-u.5	101267486	uncharacterized LOC101267486
sly-u.5	101265024	uncharacterized LOC101265024
sly-u.5	101268546	uncharacterized LOC101268546
sot-r.1	102578258	uncharacterized LOC102578258
sot-r.1	102597710	uncharacterized LOC102597710
sot-r.1	102601194	uncharacterized LOC102601194
nta-r.1	107805896	uncharacterized LOC107805896
nta-r.1	107804653	uncharacterized LOC107804653
nta-r.1	107759629	uncharacterized LOC107759629
osa-u.5	9266774	uncharacterized LOC9266774
osa-u.5	4347426	uncharacterized LOC4347426
osa-u.5	4345975	uncharacterized LOC4345975
zma-u.5	103641028	uncharacterized LOC103641028
zma-u.5	103642546	uncharacterized LOC103642546
zma-u.5	100384417	uncharacterized LOC100384417
tae-r.2	123104156	uncharacterized LOC123104156
tae-r.2	123110914	uncharacterized LOC123110914
tae-r.2	123120021	uncharacterized LOC123120021
hvu-r.1	123399368	uncharacterized LOC123399368
hvu-r.1	123399467	uncharacterized LOC123399467
hvu-r.1	123407782	uncharacterized LOC123407782
sbi-r.1	8064035	uncharacterized LOC8064035
sbi-r.1	8055870	uncharacterized LOC8055870
sbi-r.1	110429782	uncharacterized LOC110429782
bdi-r.1	100845006	uncharacterized LOC100845006
bdi-r.1	100821761	uncharacterized LOC100821761
bdi-r.1	100822798	uncharacterized LOC100822798
cre-r.1	CHLRE_10g446000v5	uncharacterized protein

Top 50 coexpressed genes to 106447579 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106447579 (bna-r.1 coexpression data)

CoexMap"106366621"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005643 [list] [network] nuclear pore

(143 genes)

IEA

GO MF

Protein

XP_022564816.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 3, cyto_mito 2, chlo 1, cysk 1

(predict for XP_022564816.2)

Subcellular
localization
TargetP

mito 7

(predict for XP_022564816.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106447579	bna-r.1 for 106431537	bna-r.1 for 106419008	bra-r.6 for 103866623	bra-r.6 for 103847033	ath-u.5 for AT2G42320	ath-u.5 for AT3G01810	ath-u.5 for AT3G57780	ghi-r.1 for 107914210	ghi-r.1 for 107891283	cit-r.1 for 102623857	cit-r.1 for 102622816	cit-r.1 for 102611142	gma-u.5 for 100818584	gma-u.5 for 100783630	gma-u.5 for 100804499	vvi-u.5 for 100266440	vvi-u.5 for 100254476	vvi-u.5 for 100253823	ppo-u.5 for 7467708	ppo-u.5 for 7494780	mtr-u.5 for 112422722	mtr-u.5 for 11425070	mtr-u.5 for 11440437	sly-u.5 for 101267486	sly-u.5 for 101265024	sly-u.5 for 101268546	sot-r.1 for 102578258	sot-r.1 for 102597710	sot-r.1 for 102601194	nta-r.1 for 107805896	nta-r.1 for 107804653	nta-r.1 for 107759629	osa-u.5 for 9266774	osa-u.5 for 4347426	osa-u.5 for 4345975	zma-u.5 for 103641028	zma-u.5 for 103642546	zma-u.5 for 100384417	tae-r.2 for 123104156	tae-r.2 for 123110914	tae-r.2 for 123120021	hvu-r.1 for 123399368	hvu-r.1 for 123399467	hvu-r.1 for 123407782	sbi-r.1 for 8064035	sbi-r.1 for 8055870	sbi-r.1 for 110429782	bdi-r.1 for 100845006	bdi-r.1 for 100821761	bdi-r.1 for 100822798	cre-r.1 for CHLRE_10g446000v5

Ortholog

Ortholog ID: 851

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC106431537

uncharacterized LOC106419008

uncharacterized LOC103865941

EEIG1/EHBP1 protein amino-terminal domain protein

nucleolar-like protein

uncharacterized LOC107891283

uncharacterized LOC107916565

uncharacterized LOC107928654

uncharacterized LOC102623857

uncharacterized LOC102622816

uncharacterized LOC102611142

uncharacterized LOC100783630

uncharacterized LOC100777738

uncharacterized LOC100775183

uncharacterized LOC100266440

uncharacterized LOC100254476

uncharacterized LOC100253823

uncharacterized LOC7494780

uncharacterized LOC7477034

uncharacterized LOC11425070

uncharacterized LOC11440437

uncharacterized LOC120576795

uncharacterized LOC101267486

uncharacterized LOC101268546

uncharacterized LOC101246002

uncharacterized LOC102578258

uncharacterized LOC102597710

uncharacterized LOC102578599

uncharacterized LOC107759629

uncharacterized LOC107787060

uncharacterized LOC107782934

uncharacterized LOC9266774

uncharacterized LOC4347426

uncharacterized LOC4345975

uncharacterized LOC103641028

uncharacterized LOC103642546

uncharacterized LOC100384417

uncharacterized LOC123110914

uncharacterized LOC123120021

uncharacterized LOC123151159

uncharacterized LOC123399368

uncharacterized LOC123399467

uncharacterized LOC123407782

uncharacterized LOC8064035

uncharacterized LOC8055870

uncharacterized LOC110429782

uncharacterized LOC100845006

uncharacterized LOC100821761

uncharacterized LOC100822798

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit00510	N-Glycan biosynthesis	3
cit00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	3
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	2
osa00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	9
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00514	Other types of O-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

106431537

106419008

103865941

821073

824947

107891283

107916565

107928654

102623857

102622816

102611142

100783630

100777738

100775183

100266440

100254476

100253823

7494780

7477034

11425070

11440437

120576795

101267486

101268546

101246002

102578258

102597710

102578599

107759629

107787060

107782934

9266774

4347426

4345975

103641028

103642546

100384417

123110914

123120021

123151159

123399368

123399467

123407782

8064035

8055870

110429782

100845006

100821761

100822798

5723839

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	3	3	3	2	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106447579 (bna-r.1 coexpression data)

Top 50 enrichment test to 106447579 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**