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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   cPT1   Undecaprenyl pyrophosphate synthetase family protein 
 gma-u.5   100812145   uncharacterized LOC100812145 
 gma-u.5   100775552   rubber cis-polyprenyltransferase HRT2 
 gma-u.5   100794720   dehydrodolichyl diphosphate synthase CPT3 
 ppo-u.5   18099099   dehydrodolichyl diphosphate synthase 6 
 mtr-u.5   11418409   dehydrodolichyl diphosphate synthase CPT3 
 mtr-u.5   11445331   dehydrodolichyl diphosphate synthase CPT3 
 sly-u.5   CPT3   cis-prenyltransferase 3 
 osa-u.5   4340251   dehydrodolichyl diphosphate synthase CPT3 
 osa-u.5   4343863   dehydrodolichyl diphosphate synthase CPT3 
 zma-u.5   100193048   uncharacterized LOC100193048 

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Top 50 coexpressed genes to cPT1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to cPT1 (ath-u.5 coexpression data)

CoexMap"106370756"


bnaLOC106370756 | Entrez gene ID : 106370756    
Species ath gma ppo mtr sly osa zma bdi hvu bra vvi cit bna sbi ghi sot nta cre tae
Paralog 1 3 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00900 [list] [network] Terpenoid backbone biosynthesis (170 genes)
GO BP
GO:0016094 [list] [network] polyprenol biosynthetic process  (25 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1651 genes)  IEA  
GO MF
Protein XP_013666208.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_013666208.2)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_013666208.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
cPT1
gma-u.5
for
100812145
gma-u.5
for
100775552
gma-u.5
for
100794720
ppo-u.5
for
18099099
mtr-u.5
for
11418409
mtr-u.5
for
11445331
sly-u.5
for
CPT3
osa-u.5
for
4340251
osa-u.5
for
4343863
zma-u.5
for
100193048


Ortholog ID: 2786
Species bna bra ghi cit gma gma ppo mtr mtr sly sot nta osa osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC106380566 LOC103874115 LOC107951372 LOC102610116 LOC100794720 LOC100812145 LOC18099099 LOC11418409 LOC11445331 CPT3 LOC102601739 LOC107814919 LOC4340251 LOC4343863 LOC100193048 LOC123178000 LOC123150652 LOC123410936 LOC110431000 LOC100845573 LOC100830261 CHLRE_06g263289v5
Function* dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase 6-like dehydrodolichyl diphosphate synthase CPT3 uncharacterized LOC100812145 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 cis-prenyltransferase 3 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase CPT3-like dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 uncharacterized LOC100193048 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00190 Oxidative phosphorylation 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
mtr04016 MAPK signaling pathway - plant 3
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04712 Circadian rhythm - plant 2
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01240 Biosynthesis of cofactors 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 4
sbi01240 Biosynthesis of cofactors 4
sbi00561 Glycerolipid metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106380566 103874115 107951372 102610116 100794720 100812145 18099099 11418409 11445331 101253666 102601739 107814919 4340251 4343863 100193048 123178000 123150652 123410936 110431000 100845573 100830261 5721996
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