ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAC05G13610D	uncharacterized BNAC05G13610D
bna-r.1	106443286	uncharacterized LOC106443286
bra-r.6	103845134	uncharacterized LOC103845134
bra-r.6	103856780	uncharacterized LOC103856780
ath-u.5	AT5G57000	DEAD-box ATP-dependent RNA helicase
ath-u.5	AT1G17490	epidermal patterning factor-like protein
ath-u.5	AT1G72690	neurofilament heavy protein
ghi-r.1	107916390	uncharacterized LOC107916390
ghi-r.1	121208597	uncharacterized LOC121208597
cit-r.1	102617476	uncharacterized LOC102617476
cit-r.1	102623374	uncharacterized LOC102623374
gma-u.5	100783564	uncharacterized LOC100783564
gma-u.5	100527411	uncharacterized LOC100527411
gma-u.5	100500421	uncharacterized LOC100500421
vvi-u.5	100256150	uncharacterized LOC100256150
ppo-u.5	18099445	uncharacterized LOC18099445
ppo-u.5	7456841	uncharacterized LOC7456841
mtr-u.5	11438774	uncharacterized LOC11438774
mtr-u.5	25500497	uncharacterized LOC25500497
sly-u.5	104644831	uncharacterized LOC104644831
sly-u.5	101257574	uncharacterized LOC101257574
sot-r.1	102606108	uncharacterized LOC102606108
sot-r.1	102589581	uncharacterized LOC102589581
nta-r.1	107828663	uncharacterized LOC107828663
nta-r.1	107825668	uncharacterized LOC107825668
nta-r.1	107796703	uncharacterized LOC107796703
osa-u.5	4346862	uncharacterized LOC4346862
zma-u.5	100501056	uncharacterized LOC100501056
tae-r.2	123103589	uncharacterized LOC123103589
tae-r.2	123111796	uncharacterized LOC123111796
tae-r.2	123121360	uncharacterized LOC123121360
hvu-r.1	123395086	uncharacterized LOC123395086
sbi-r.1	110432517	uncharacterized LOC110432517
bdi-r.1	100836081	uncharacterized LOC100836081

Top 50 coexpressed genes to BNAC05G13610D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAC05G13610D (bna-r.1 coexpression data)

CoexMap"106375098"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013670450.2 [sequence] [blastp]
XP_013670451.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto_nucl 4, chlo 3, cyto 2	(predict for XP_013670450.2)
nucl 4, cyto_nucl 4, chlo 3, cyto 2	(predict for XP_013670451.2)

Subcellular
localization
TargetP

mito 6	(predict for XP_013670450.2)
mito 6	(predict for XP_013670451.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAC05G13610D	bna-r.1 for 106443286	bra-r.6 for 103845134	bra-r.6 for 103856780	ath-u.5 for AT5G57000	ath-u.5 for AT1G17490	ath-u.5 for AT1G72690	ghi-r.1 for 107916390	ghi-r.1 for 121208597	cit-r.1 for 102617476	cit-r.1 for 102623374	gma-u.5 for 100783564	gma-u.5 for 100527411	gma-u.5 for 100500421	vvi-u.5 for 100256150	ppo-u.5 for 18099445	ppo-u.5 for 7456841	mtr-u.5 for 11438774	mtr-u.5 for 25500497	sly-u.5 for 104644831	sly-u.5 for 101257574	sot-r.1 for 102606108	sot-r.1 for 102589581	nta-r.1 for 107828663	nta-r.1 for 107825668	nta-r.1 for 107796703	osa-u.5 for 4346862	zma-u.5 for 100501056	tae-r.2 for 123103589	tae-r.2 for 123111796	tae-r.2 for 123121360	hvu-r.1 for 123395086	sbi-r.1 for 110432517	bdi-r.1 for 100836081

Ortholog

Ortholog ID: 4142

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC106443286

uncharacterized LOC106351393

uncharacterized LOC103845134

uncharacterized LOC103872537

DEAD-box ATP-dependent RNA helicase

epidermal patterning factor-like protein

neurofilament heavy protein

uncharacterized LOC107916390

uncharacterized LOC121208597

uncharacterized LOC102617476

uncharacterized LOC102623374

uncharacterized LOC100783564

uncharacterized LOC100527411

uncharacterized LOC100500421

uncharacterized LOC100256150

uncharacterized LOC18099445

uncharacterized LOC7456841

uncharacterized LOC11438774

uncharacterized LOC25500497

uncharacterized LOC104644831

uncharacterized LOC101257574

uncharacterized LOC102606108

uncharacterized LOC102589581

uncharacterized LOC107828663

uncharacterized LOC107825668

uncharacterized LOC107801713

uncharacterized LOC4346862

uncharacterized LOC100501056

uncharacterized LOC123103589

uncharacterized LOC123111796

uncharacterized LOC123121360

uncharacterized LOC123395086

uncharacterized LOC110432517

uncharacterized LOC100836081

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	5
bna00513	Various types of N-glycan biosynthesis	5
bna04141	Protein processing in endoplasmic reticulum	5
bna03082	ATP-dependent chromatin remodeling	3
bna03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04130	SNARE interactions in vesicular transport	3
ath04145	Phagosome	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	3
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00330	Arginine and proline metabolism	3
gma00053	Ascorbate and aldarate metabolism	2
gma00562	Inositol phosphate metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4
ppo03010	Ribosome	3
ppo03040	Spliceosome	3
ppo03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	3
nta04626	Plant-pathogen interaction	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	3
nta00561	Glycerolipid metabolism	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	4
tae04142	Lysosome	4
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae00190	Oxidative phosphorylation	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

106443286

106351393

103845134

103872537

835802

838322

843601

107916390

121208597

102617476

102623374

100783564

100527411

100500421

100256150

18099445

7456841

11438774

25500497

104644831

101257574

102606108

102589581

107828663

107825668

107801713

4346862

100501056

123103589

123111796

123121360

123395086

110432517

100836081

The preparation time of this page was 0.5 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	3	2	2	3	1	2	2	2	2	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAC05G13610D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAC05G13610D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**