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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106376460   scarecrow-like protein 30 
 ath-u.5   AT2G37650   GRAS family transcription factor 
 ath-u.5   AT3G46600   GRAS family transcription factor 
 ath-u.5   AT5G59450   GRAS family transcription factor 
 gma-u.5   100807788   scarecrow-like protein 9 
 gma-u.5   100801824   scarecrow-like protein 9 
 gma-u.5   100796903   scarecrow-like protein 14 
 vvi-u.5   100252795   scarecrow-like protein 9 
 ppo-u.5   7467554   scarecrow-like protein 9 
 ppo-u.5   7488108   scarecrow-like protein 33 
 ppo-u.5   7465101   scarecrow-like protein 14 
 mtr-u.5   25487898   scarecrow-like protein 30 
 mtr-u.5   11408765   scarecrow-like protein 14 
 mtr-u.5   11416797   scarecrow-like protein 14 
 sly-u.5   101256274   scarecrow-like protein 14 
 sly-u.5   101247176   scarecrow-like protein 9 
 sly-u.5   101246721   scarecrow-like protein 14 
 osa-u.5   4333775   scarecrow-like protein 9 
 osa-u.5   4336820   scarecrow-like protein 9 
 zma-u.5   100381402   uncharacterized LOC100381402 
 zma-u.5   100216906   uncharacterized LOC100216906 

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Top 50 coexpressed genes to 106376460 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106376460 (bna-r.1 coexpression data)

CoexMap"106376460"


bnaLOC106376460 | Entrez gene ID : 106376460    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 3 3 1 3 3 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (2444 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
Protein XP_013671999.1 [sequence] [blastp]
XP_013672000.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_013671999.1)
chlo 4,  cyto 4,  nucl 1,  vacu 1  (predict for XP_013672000.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_013671999.1)
other 6  (predict for XP_013672000.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106376460
ath-u.5
for
AT2G37650
ath-u.5
for
AT3G46600
ath-u.5
for
AT5G59450
gma-u.5
for
100807788
gma-u.5
for
100801824
gma-u.5
for
100796903
vvi-u.5
for
100252795
ppo-u.5
for
7467554
ppo-u.5
for
7488108
ppo-u.5
for
7465101
mtr-u.5
for
25487898
mtr-u.5
for
11408765
mtr-u.5
for
11416797
sly-u.5
for
101256274
sly-u.5
for
101247176
sly-u.5
for
101246721
osa-u.5
for
4333775
osa-u.5
for
4336820
zma-u.5
for
100381402
zma-u.5
for
100216906


Ortholog ID: 352
Species bna bna bra bra ath ath ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma sbi sbi bdi
Symbol LOC106420491 LOC106376460 LOC103836438 LOC103857726 AT3G46600 AT2G29065 LOC107906564 LOC107900465 LOC102621708 LOC102622070 LOC100801824 LOC121173030 LOC100264982 LOC7485697 LOC7487261 LOC25487896 LOC25487897 LOC101246721 LOC101256274 LOC102585418 LOC102598749 LOC107826445 LOC107802916 LOC4327499 LOC100216906 LOC8058890 LOC8057357 LOC100824633
Function* scarecrow-like protein 11 scarecrow-like protein 30 scarecrow-like protein 14 scarecrow-like protein 9 GRAS family transcription factor GRAS family transcription factor scarecrow-like protein 33 scarecrow-like protein 30 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 31 scarecrow-like protein 30 scarecrow-like protein 33 scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 11 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 9 uncharacterized LOC100216906 scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 7
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 9
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106420491 106376460 103836438 103857726 823813 10723125 107906564 107900465 102621708 102622070 100801824 121173030 100264982 7485697 7487261 25487896 25487897 101246721 101256274 102585418 102598749 107826445 107802916 4327499 100216906 8058890 8057357 100824633
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