ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	CYCA2;4	Cyclin A2;4
ath-u.5	CYC3B	mitotic-like cyclin 3B from Arabidopsi
gma-u.5	100793657	cyclin-A2-4
gma-u.5	100789757	cyclin-A2-4
gma-u.5	100777132	cyclin-A2-2
vvi-u.5	100254892	cyclin-A2-3
vvi-u.5	100245617	cyclin-A2-2
ppo-u.5	7490979	cyclin-A2-4
ppo-u.5	7458999	cyclin-A2-2
mtr-u.5	11430006	cyclin-A2-4
mtr-u.5	11431336	cyclin-A2-2
mtr-u.5	11435451	cyclin-A2-1
sly-u.5	101261801	cyclin-A2-4
sly-u.5	CycA2	cyclin A2
osa-u.5	4352280	cyclin-A2-1-like
zma-u.5	100280697	cyclin-A2
zma-u.5	100285386	cyclin-A2

functional annotation

KEGG

GO BP

GO:0044772 [list] [network] mitotic cell cycle phase transition	(137 genes)	IEA
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity	(184 genes)	IEA

GO CC

GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex	(262 genes)	IEA
GO:0005634 [list] [network] nucleus	(9971 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(16489 genes)	IEA

GO MF

GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity

(183 genes)

IEA

Protein

XP_013673309.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 2, cyto 1, mito_plas 1, nucl 1, plas 1, extr 1, vacu 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_013673309.1)

Subcellular
localization
TargetP

other 4

(predict for XP_013673309.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for CYCA2;4	ath-u.5 for CYC3B	gma-u.5 for 100793657	gma-u.5 for 100789757	gma-u.5 for 100777132	vvi-u.5 for 100254892	vvi-u.5 for 100245617	ppo-u.5 for 7490979	ppo-u.5 for 7458999	mtr-u.5 for 11430006	mtr-u.5 for 11431336	mtr-u.5 for 11435451	sly-u.5 for 101261801	sly-u.5 for CycA2	osa-u.5 for 4352280	zma-u.5 for 100280697	zma-u.5 for 100285386

Ortholog ID: 1246

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CYC3B

CYCA2;4

CycA2

Function^*

cyclin-A2-2

cyclin-A2-4

cyclin-A2-3

mitotic-like cyclin 3B from Arabidopsi

Cyclin A2;4

cyclin-A2-2

cyclin-A2-4

cyclin-A2-1

cyclin-A2-4

cyclin-A2-2

cyclin-A2-3

cyclin-A2-4

cyclin A2

cyclin-A2-4

cyclin-A2-2-like

cyclin-A2-2

cyclin-A2-1-like

cyclin-A2

cyclin-A2-1

cyclin-A2-1-like

cyclin-A2-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	3
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00620	Pyruvate metabolism	5
vvi01200	Carbon metabolism	5
vvi00061	Fatty acid biosynthesis	5
vvi01212	Fatty acid metabolism	5
vvi00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	6
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4
bdi00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106391323

111197998

103858695

103842893

831001

844377

121230390

107897231

102630346

102630886

100793657

100805701

100245617

100254892

7490979

11430005

11430006

543745

101261801

102604868

107761856

4352280

100280697

100285386

123080961

123176985

123445663

8064979

100824825

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CYCA2;4 (ath-u.5 coexpression data)

Top 50 enrichment test to CYCA2;4 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	2	2	3	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CYCA2;4 (ath-u.5 coexpression data)

Top 50 enrichment test to CYCA2;4 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**